DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3165 and AT5G40310

DIOPT Version :10

Sequence 1:NP_608732.1 Gene:CG3165 / 33503 FlyBaseID:FBgn0031484 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001330756.1 Gene:AT5G40310 / 834029 AraportID:AT5G40310 Length:357 Species:Arabidopsis thaliana


Alignment Length:123 Identity:24/123 - (19%)
Similarity:43/123 - (34%) Gaps:43/123 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 GLSNYL----LERESQLDTDAAQL--------IVSFLKHLPSPVCLVAHNGWGFDFPI-LRQAFE 148
            ||.|:|    ||..|.:..|.|:.        :.:.||:|.....       |:|..: ::..:|
plant   233 GLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYLTQAYL-------GYDIHVGIQDPYE 290

  Fly   149 KLNIELPQSLTCVDSLRAFMEI-------------DDTQQKETSQLKVPNDVQEIIPE 193
                      .||.::|.:..:             .|||..........|:::.:.||
plant   291 ----------DCVATMRLYTRMRYQKHRAEAYPLASDTQNHNNFAAWRQNELERMSPE 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3165NP_608732.1 TREX1_2 20..173 CDD:99839 18/101 (18%)
AT5G40310NP_001330756.1 C2H2 Zn finger 17..39 CDD:275371
C2H2 Zn finger 46..63 CDD:275371
REX4_like 136..300 CDD:99847 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.

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