DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3165 and AT3G50090

DIOPT Version :10

Sequence 1:NP_608732.1 Gene:CG3165 / 33503 FlyBaseID:FBgn0031484 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_190578.1 Gene:AT3G50090 / 824171 AraportID:AT3G50090 Length:322 Species:Arabidopsis thaliana


Alignment Length:185 Identity:38/185 - (20%)
Similarity:59/185 - (31%) Gaps:74/185 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QPKISTFAVLDLETTNLPAYRNNRVSITELCIYAFEAAL---LKKKKKEQDQDEQQELPAAPRVL 75
            :|.::|..:      ::..|...:..::..|::...||:   |...||..|              
plant   178 RPSLNTLCM------SVLGYEVQKAGVSHHCVHDAAAAMKLALAVIKKRVD-------------- 222

  Fly    76 HKLNVLFQPSMVVDPEAERITGLSNYLLER------ESQLDTDAAQLIVSFLKHLP-------SP 127
                    .::.:..|||:    |...|.|      ..:|..|.|      ||..|       .|
plant   223 --------TTITLTKEAEK----SRLFLHRIPHHLSSEELKKDLA------LKFFPKNFTIDVKP 269

  Fly   128 V-------CLVAHNGWGFDFPILRQAFEKLN-------IELPQSL-TCVDSLRAF 167
            .       |.|...|...:   ..||||.:|       ..|||.| :|  |:..|
plant   270 AKTQGGYYCAVVIFGSSVE---ANQAFENVNGYKETDSSGLPQKLISC--SISTF 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3165NP_608732.1 TREX1_2 20..173 CDD:99839 36/179 (20%)
AT3G50090NP_190578.1 DnaQ_like_exo 76..205 CDD:447876 4/32 (13%)

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