DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3165 and Y56A3A.33

DIOPT Version :10

Sequence 1:NP_608732.1 Gene:CG3165 / 33503 FlyBaseID:FBgn0031484 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001366957.1 Gene:Y56A3A.33 / 176636 WormBaseID:WBGene00013244 Length:342 Species:Caenorhabditis elegans


Alignment Length:198 Identity:34/198 - (17%)
Similarity:56/198 - (28%) Gaps:83/198 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 KPKQNTETCLKEPEAVVNIDWRTRNETTPNRPILKPTEAFAKRKLLRDGDEDDLEE--QTPPKRK 257
            ||..:|:.||.|...|.:..|                             ||.|.|  .:|..:.
 Worm   137 KPGPSTKGCLVEDRHVFSQSW-----------------------------EDTLWEFVVSPQAKG 172

  Fly   258 PDEFRSRR---------QLFSGCKCAENKRYPPRGVYNLESLYTRIFKI---------------- 297
            .|:.||.:         ...:|.:.|.......:|...|::....:|::                
 Worm   173 KDDHRSNKVFALDCELVHTLNGLEVARVSLVDMKGKVLLDTFALPVFEVISFNSTFSGVTEKDME 237

  Fly   298 -------------------PALSAHQAEADVVMTTKLIQHYGIDFLAFAEEQAIPFQQVVPLGSP 343
                               ..|..|..|:| :...:|:.|..||       .|:.|..|.|..|.
 Worm   238 SAISLEACRLQLFQLINSETLLVGHSLESD-LKALRLVHHNVID-------TAVLFSIVDPSRSY 294

  Fly   344 VCR 346
            :.:
 Worm   295 ILK 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3165NP_608732.1 TREX1_2 20..173 CDD:99839
Y56A3A.33NP_001366957.1 REX1_like 182..332 CDD:99848 18/124 (15%)
Blue background indicates that the domain is not in the aligned region.

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