DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3165 and panl-2

DIOPT Version :10

Sequence 1:NP_608732.1 Gene:CG3165 / 33503 FlyBaseID:FBgn0031484 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_498519.1 Gene:panl-2 / 175974 WormBaseID:WBGene00017951 Length:1131 Species:Caenorhabditis elegans


Alignment Length:274 Identity:48/274 - (17%)
Similarity:87/274 - (31%) Gaps:86/274 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 NGWGFDFPILRQAFEKLNIELPQSLTCVDS----LRAFMEIDDTQQKETSQLKVPNDVQEIIPEL 194
            ||...:|||........:....::...|.:    :..|.:.|..|..|.|:     :.....|.:
 Worm   286 NGNSAEFPIETSLISAFDFSSNKNFIAVGNHCGIVNVFADRDQPQVNENSK-----ETVFAAPPV 345

  Fly   195 KP------KQNTETCLKEP-----EAVVNIDWRTRNETTPNRPILKPTEA--------------- 233
            :|      ...|:|....|     |.:|: ||.|.......|....|||.               
 Worm   346 QPPLSFAIDDTTQTFGSIPLGFSQEPLVS-DWPTELTQIVYRRRKPPTEQTNVKSIHYLSQIKNP 409

  Fly   234 ---------------FAKRKLLRDGDEDDLEEQTPPKRKPDEFRSRRQLFSGCKCAENKRYPPRG 283
                           |.:.:|:...::...:|:.|.:.|              :...:|.|..|.
 Worm   410 RINSKLKRHNIVPYFFEQEELIEASNDHGSKEEAPQEMK--------------RIKVSKLYKKRP 460

  Fly   284 VYNLESLYTRIFKIPALSAH-QAEADVVMTTKLIQH------YGIDFLAFAEEQAI----PFQQV 337
            :.        :.::||...: |.|.....|..:|:|      :|::.:|....|..    |.:.:
 Worm   461 LI--------VNQVPARRGNSQDETQETYTWNIIRHVTMQSTHGMNLVANTLVQVAYSLSPIRSI 517

  Fly   338 VPLGSPVCRKKSAI 351
            |.  ..:|.:.|.|
 Worm   518 VL--RHICTEDSCI 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3165NP_608732.1 TREX1_2 20..173 CDD:99839 8/42 (19%)
panl-2NP_498519.1 WD40 28..324 CDD:475233 6/37 (16%)
UCH_1 494..>693 CDD:463872 8/38 (21%)
PAN2_exo 909..1075 CDD:99846
Blue background indicates that the domain is not in the aligned region.

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