Protein Alignment gammaTub23C and Tube1

DIOPT Version :9

• Sequence 1: NP_476804.1
• Gene: gammaTub23C / 33501
• FlyBaseID: FBgn0260639
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_082282.1
• Gene: Tube1 / 71924
• MGIID: 1919174
• Length: 475
• Species: Mus musculus
• Alignment Length: 481
• Identity: 128/481 - (26%)
• Similarity: 235/481 - (48%)
• Gaps: 71/481 - (14%)

  Fly     3 SEIITLQLGQCGNQIGFEFWKRLCLEH-GISPSGVLEDFANDGLDRKDVFFYQAD-----DDHYI 61
            ::.:.:|:||||||||..||.....|| .::..|:.:|..:.       ||...|     |...|
Mouse     2 TQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDDAISS-------FFRNVDTRAVGDGGSI 59

  Fly    62 ---------PRAVLLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASGYSQ-GEKLQE 116
                     .||||:|:|..|:|.|:......:::.:.  |.....|:|||||.|:.. |...:|
Mouse    60 SKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQ--LITDISGSGNNWAVGHKVFGCLYRE 122

  Fly   117 EVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDV 181
            ::.:.:.:.|:..|.|:.|.:.||:.||||||:|:|:::.|.|.:|:......:|:|:.::  ||
Mouse   123 QILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSED--DV 185

  Fly   182 VVQPYNSMLTLKRLTTAADSVVVLDNTAL---------------------------NRIACDRLH 219
            :..||||||.:|.|...||.|:.:||.:|                           :.:...:.|
Mouse   186 ITSPYNSMLAMKELNEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNMGAVKKH 250

  Fly   220 IQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTSDSDIHT 284
            .:.| |..:||:|:.::...|::.|:...:|.:|..::..|:|.|:||:|::..|||.:.:|
Mouse   251 HKKP-FDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLAD--- 311

  Fly   285 QQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILNIIQGEVDPTQVHKSLQRIRDRK 349
               ||:....:..:........:.::...|   .|..|::...|::|.|..:.:.::::|:  :.
Mouse   312 ---VNIPPRRLDQMFSDAFSKDHQLIQADP---RHSLYLACALIVRGNVQISDLRRNIERL--KP 368

  Fly   350 MAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSLFERALNQYDKLRKRGAFLDQFR 414
            ..||:.|.....:.:|. |.|.|..:|  |.|.|||:|.:...|.....::.:|.|:.|.|..:.
Mouse   369 ALQFVSWNQEGWKTSLC-SVPPVGHSH--SLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYL 430

  Fly   415 REDIFKDDLNELDESRETVDCLVQEY 440
            :.|..::  :...|:..::..|:|||
Mouse   431 QVDGMEE--STFTEAVSSLSALIQEY 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaTub23C	NP_476804.1	PLN00222	1..451	CDD:215108	128/481 (27%)
		gamma_tubulin	4..440	CDD:276957	126/478 (26%)
Tube1	NP_082282.1	epsilon_tubulin	2..457	CDD:276959	128/481 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5023
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900