Protein Alignment gammaTub23C and Tuba8

DIOPT Version :9

• Sequence 1: NP_476804.1
• Gene: gammaTub23C / 33501
• FlyBaseID: FBgn0260639
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: XP_017448333.2
• Gene: Tuba8 / 500377
• RGDID: 1566041
• Length: 540
• Species: Rattus norvegicus
• Alignment Length: 454
• Identity: 142/454 - (31%)
• Similarity: 240/454 - (52%)
• Gaps: 25/454 - (5%)

  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFA---NDGLDRKDVFFYQADDDHYIPRAV 65
            |.|::.:||.|.|||...|:..||||||...|.....|   ||. |....||.:..:..::||||
  Rat    94 ECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDD-DSFTTFFSETGNGKHVPRAV 157

  Fly    66 LLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGS 129
            ::||||.|::.:....|.:|::||.:...|.  .|.||:|.| |:.|::..:.|.|.|.:..|..
  Rat   158 MVDLEPTVVDEVRAGTYRQLFHPEQLITGKE--DAANNYARGHYTVGKESIDLVLDRIRKLTDAC 220

  Fly   130 DSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKR 194
            ..|:||::.||..||||||..|.:||||:..|.||....|:::| ..::|..||:||||:||...
  Rat   221 SGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHT 284

  Fly   195 LTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAP 259
            ....:|...::||.|:..|....|.|:.|:::.:|.|:|.|:|..|.:||:...:|.:|......
  Rat   285 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTN 349

  Fly   260 LIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYIS 324
            |:|.|::||.:..|.|:.|....:.:||      :|.::.....:|.:.||...|   .|..|::
  Rat   350 LVPYPRIHFPLVTYAPIVSAEKAYHEQL------SVAEITSSCFEPNSQMVKCDP---RHGKYMA 405

  Fly   325 ILNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLA 384
            ...:.:|:|.|..|:.::..|:.::..||:.|.||..:|.::...|.|.....::.:     ||:
  Rat   406 CCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 470

  Fly   385 NHTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDY 448
            |.|:|...:.|..:::|.:..:.||:..:..|.:   :..|..|:||.:..|.::||....:.:
  Rat   471 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM---EEGEFSEAREDLAALEKDYEEVGTDSF 531

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaTub23C	NP_476804.1	PLN00222	1..451	CDD:215108	142/454 (31%)
		gamma_tubulin	4..440	CDD:276957	140/444 (32%)
Tuba8	XP_017448333.2	PTZ00335	93..530	CDD:185562	142/451 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5023
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810