DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and tuba2

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_073771771.1 Gene:tuba2 / 406303 ZFINID:ZDB-GENE-040426-1970 Length:460 Species:Danio rerio


Alignment Length:471 Identity:150/471 - (31%)
Similarity:246/471 - (52%) Gaps:31/471 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVL--EDFANDGLDRKDVFFYQADDDHYIPRAVL 66
            |.|::.:||.|.|||...|:..||||||.|.|.:  :.....|.|..:.||.:.....::||||.
Zfish    12 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVF 76

  Fly    67 LDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSD 130
            :||||.||:.:....||:|::||.:...|.  .|.||:|.| |:.|:::.:.|.|.|.:.||...
Zfish    77 VDLEPTVIDEVRTGTYSQLFHPEQLITGKE--DAANNYARGHYTIGKEIIDLVLDRIRKLADQCT 139

  Fly   131 SLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195
            .|:||::.||..||||||..|.:||||:..|.||....||::| ..::|..||:||||:||....
Zfish   140 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTHTT 203

  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260
            ...:|...::||.|:..|....|.|..|:::.:|.|:|.|:|..|.:||:...:|.:|......|
Zfish   204 LEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNL 268

  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325
            :|.|::||.:..|.|:.|......:||      :|.::.....:|.|.||...|   .|..|::.
Zfish   269 VPYPRIHFPLATYAPVISAEKACHEQL------SVSEITNACFEPANQMVKCDP---RHGKYMAC 324

  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLAN 385
            ..:.:|:|.|..|:.::..|:.::..||:.|.||..:|.::...|.|.....::.:     ||:|
Zfish   325 CLLYRGDVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLARVQRAVCMLSN 389

  Fly   386 HTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDYMQ 450
            .|:|...:.|..:::|.:..:.||:..:..|.:   :..|..|:||.:        ||..:||.:
Zfish   390 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM---EEGEFSEAREDM--------AALEKDYEE 443

  Fly   451 FSVKRGNGPVDSKSED 466
            ..|....|..:.:.|:
Zfish   444 VGVDSVEGEGEEEGEE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 143/443 (32%)
tuba2XP_073771771.1 None

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