DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and alphaTub67C

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:480 Identity:144/480 - (30%)
Similarity:247/480 - (51%) Gaps:52/480 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVL-----------------EDFANDGLDRKDVF 51
            |::::|:||||.|||...|:...|||||:..|.|                 :..|||.    ..|
  Fly     3 EVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDA----RTF 63

  Fly    52 FYQADDDHYIPRAVLLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQ 115
            |.:..:...:||::.:||||.||:.:......:||:||.:...|.  .|.||:|.| ||.|:::.
  Fly    64 FTETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKE--DAANNYARGRYSIGKEVI 126

  Fly   116 EEVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISD 180
            :.|...:.:.|:..|||:||::.||:.||||||..|.::|||:..|.||....|:|:|: .::|.
  Fly   127 DRVTSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPS-PKVST 190

  Fly   181 VVVQPYNSMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRY 245
            .||:|||::||.......:|.|.::||.|:..|..:.|.:..|::..:|.|::.|:|.:|.:||:
  Fly   191 AVVEPYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRF 255

  Fly   246 PSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTS-DSDIHTQQLVNVRKTTVLDVMRRLLQPKNMM 309
            ...||.:|......|:|.|::||.:..|.||.| :...|.|..:    ||:.:.   ..:..|||
  Fly   256 SGSMNVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAI----TTLTNA---CFESSNMM 313

  Fly   310 VSTGPDKSNHHCYISILNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSP-YVQ 373
            |...|....   :::...:.:|:|.|..|:.::..|:.::..||:.|.||..::.::...| :|.
  Fly   314 VKCDPRAGK---FMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVP 375

  Fly   374 SNHRV----SGLMLANHTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVD 434
            .....    :..||:|.|:|...|.....::|.:.|:.||:..:..|.:   :..|..|:||.:.
  Fly   376 DGDLAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGM---EEGEFTEARENIA 437

  Fly   435 CLVQEY--------EAATREDYMQF 451
            .|.:::        |....||:.:|
  Fly   438 VLERDFEEVGLDNAEEGGDEDFDEF 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 140/459 (31%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 140/462 (30%)

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