Sequence 1: | NP_476804.1 | Gene: | gammaTub23C / 33501 | FlyBaseID: | FBgn0260639 | Length: | 475 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006256590.1 | Gene: | Tube1 / 361856 | RGDID: | 1306048 | Length: | 475 | Species: | Rattus norvegicus |
Alignment Length: | 482 | Identity: | 127/482 - (26%) |
---|---|---|---|
Similarity: | 231/482 - (47%) | Gaps: | 73/482 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 SEIITLQLGQCGNQIGFEFWKRLCLEH-GISPSGVLEDFANDGLDRKDVFFYQADD--------- 57
Fly 58 -----DHYIPRAVLLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASGYSQ-GEKLQE 116
Fly 117 EVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDV 181
Fly 182 VVQPYNSMLTLKRLTTAADSVVVLDNTAL----------------------------NRIACDRL 218
Fly 219 HIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTSDSDIH 283
Fly 284 TQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILNIIQGEVDPTQVHKSLQRIRDR 348
Fly 349 KMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSLFERALNQYDKLRKRGAFLDQF 413
Fly 414 RREDIFKDDLNELDESRETVDCLVQEY 440 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gammaTub23C | NP_476804.1 | PLN00222 | 1..451 | CDD:215108 | 127/482 (26%) |
gamma_tubulin | 4..440 | CDD:276957 | 125/479 (26%) | ||
Tube1 | XP_006256590.1 | PTZ00387 | 1..470 | CDD:240395 | 127/482 (26%) |
epsilon_tubulin | 2..457 | CDD:276959 | 127/482 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5023 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |