DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and tbb-6

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_506075.2 Gene:tbb-6 / 179680 WormBaseID:WBGene00006539 Length:426 Species:Caenorhabditis elegans


Alignment Length:457 Identity:140/457 - (30%)
Similarity:242/457 - (52%) Gaps:60/457 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLD 68
            |||.:|:||||||||.:||:.:..|||:...|..:......|:|...::.:.:...|:|||:|:|
 Worm     3 EIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVD 67

  Fly    69 LEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSL 132
            |:|..||.:..:.|.||::|||....:  .||||||:.| |.||.::.::|..:|.|||:.:|||
 Worm    68 LDPESINYVRSTQYGKLFDPENAVSGE--SGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSL 130

  Fly   133 EGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTT 197
            |||.|.||:.||||||:||.::.:|.:.|..|.:.|.|:.|:. ::||.||:|||::|::..|..
 Worm   131 EGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSA-KVSDTVVEPYNAILSMPHLMD 194

  Fly   198 AADSVVVLDNTALNRIACDRLHIQN-PSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLI 261
            ..|....:||.|:..|....|.::| .::..:|:|.|..:|..||..|:...:..::..|..  .
 Worm   195 NCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKLNT--A 257

  Fly   262 PTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHH--CYIS 324
            .:|:|||.||.:.|      ::.:.:::.:..::.|:.:::|..||:|.      .||:  .::|
 Worm   258 GSPRLHFFMTSFAP------VYGKGIIDCQAFSISDLTQQVLDAKNIMT------CNHNQGKFLS 310

  Fly   325 ILNIIQGE---------------VDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQS 374
            ...|.:|:               .||:::.:||.:..:..:.. ||          ||..     
 Worm   311 SAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCD-IP----------SRGL----- 359

  Fly   375 NHRVSGLMLANHTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQE 439
              :.|...:||.|:|....:|...|:..|.:|.|||..:..|:      :|..::...|:.|:.|
 Worm   360 --KTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYTMEE------SEFTDAENKVNDLISE 416

  Fly   440 YE 441
            ::
 Worm   417 FQ 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 139/454 (31%)
tbb-6NP_506075.2 beta_tubulin 2..421 CDD:276956 140/457 (31%)

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