Sequence 1: | NP_001137776.1 | Gene: | Rrp1 / 33500 | FlyBaseID: | FBgn0004584 | Length: | 706 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_181677.1 | Gene: | ARP / 818744 | AraportID: | AT2G41460 | Length: | 536 | Species: | Arabidopsis thaliana |
Alignment Length: | 485 | Identity: | 159/485 - (32%) |
---|---|---|---|
Similarity: | 227/485 - (46%) | Gaps: | 99/485 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 312 KKEGKEPAPGKKQK-----KSADK-ENGVVEEEAKP----------STETK---PAKGRKK---A 354
Fly 355 PVKAEDVEDIEEAAEESKPARGR----KKAAAKAEEPDVDE-----------------ESGSKSM 398
Fly 399 LAEQSGCGGAAVLKSLQTMLNFCFPATKKAK---KAETKTTVTLD----KDAFALPADKE----- 451
Fly 452 -----------FN---------------LKICSWNVAGLRAWLKKD---GLQLIDLEEPDIFCLQ 487
Fly 488 ETKCANDQLPE-EVTRLPGY-HPYWLCMPG--GYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMIT 548
Fly 549 AEYEKFYLINVYVPNSGRKLVNLEPRM-RWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENP 612
Fly 613 KNNTKNAGFTQEERDKM-TELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVS 676
Fly 677 ERFVPKVVEHEIRSQCLGSDHCPITIFFNI 706 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp1 | NP_001137776.1 | RecX | 15..>217 | CDD:294607 | |
RR_TM4-6 | <314..>388 | CDD:283990 | 22/99 (22%) | ||
Ape1-like_AP-endo | 454..704 | CDD:197321 | 118/258 (46%) | ||
ARP | NP_181677.1 | RR_TM4-6 | 80..>234 | CDD:283990 | 33/161 (20%) |
SAP | 97..131 | CDD:128789 | 8/33 (24%) | ||
Ape1-like_AP-endo | 277..534 | CDD:197321 | 118/257 (46%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 197 | 1.000 | Domainoid score | I895 |
eggNOG | 1 | 0.900 | - | - | E1_COG0708 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 210 | 1.000 | Inparanoid score | I1253 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0005771 | |
OrthoInspector | 1 | 1.000 | - | - | oto3990 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101139 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR22748 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X5491 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.820 |