Protein Alignment Rrp1 and ARP

DIOPT Version :10

• Sequence 1: NP_001137776.1
• Gene: Rrp1 / 33500
• FlyBaseID: FBgn0004584
• Length: 706
• Species: Drosophila melanogaster
• Sequence 2: NP_181677.1
• Gene: ARP / 818744
• AraportID: AT2G41460
• Length: 536
• Species: Arabidopsis thaliana
• Alignment Length: 485
• Identity: 159/485 - (32%)
• Similarity: 227/485 - (46%)
• Gaps: 99/485 - (20%)

  Fly   312 KKEGKEPAPGKKQK-----KSADK-ENGVVEEEAKP----------STETK---PAKGRKK---A 354
            :||.|.|.....|.     ...|: |.|.::::.|.          ||..|   |.||||:   :
plant    61 RKELKIPGAAIDQNCHQMGSDTDRDEMGTLQDDRKEIEAMTVQELRSTLRKLGVPVKGRKQELIS 125

  Fly   355 PVKAEDVEDIEEAAEESKPARGR----KKAAAKAEEPDVDE-----------------ESGSKSM 398
            .::.....::.:..|.|...|..    |:..:..|||..||                 :|..|::
plant   126 TLRLHMDSNLPDQKETSSSTRSDSVTIKRKISNREEPTEDECTNSEAYDIEHGEKRVKQSTEKNL 190

  Fly   399 LAEQSGCGGAAVLKSLQTMLNFCFPATKKAK---KAETKTTVTLD----KDAFALPADKE----- 451
            .|:.|   ..|:.|..::::.     |.|.:   |.||.:|::.:    ::..:.|:..|
plant   191 KAKVS---AKAIAKEQKSLMR-----TGKQQIQSKEETSSTISSELLKTEEIISSPSQSEPWTVL 247

  Fly   452 -----------FN---------------LKICSWNVAGLRAWLKKD---GLQLIDLEEPDIFCLQ 487
                       :|               :|:.:|||.|||..||.:   .|||...|..||.|||
plant   248 AHKKPQKDWKAYNPKTMRPPPLPEGTKCVKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQ 312

  Fly   488 ETKCANDQLPE-EVTRLPGY-HPYWLCMPG--GYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMIT 548
            |||.....:.| :.|.:.|| |.:|.|...  ||:|.||.|:|.|:.|.||.|....|..||::|
plant   313 ETKLQVKDVEEIKKTLIDGYDHSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVT 377

  Fly   549 AEYEKFYLINVYVPNSGRKLVNLEPRM-RWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENP 612
            ||::.|||||.||||||..|..|..|: .|::....::|:|:..||||:.||:|.:|..||:.||
plant   378 AEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNP 442

  Fly   613 KNNTKNAGFTQEERDKM-TELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVS 676
            ..|.::||||.|||... ..||..|||||||..:|...| ||:|.|....|..|.||||||.|||
plant   443 AGNKRSAGFTIEERQSFGANLLDKGFVDTFRKQHPGVVG-YTYWGYRHGGRKTNKGWRLDYFLVS 506

  Fly   677 ERFVPKVVEHEIRSQCLGSDHCPITIFFNI 706
            :.....|.:..|.....|||||||.:...:
plant   507 QSIAANVHDSYILPDINGSDHCPIGLILKL 536

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp1	NP_001137776.1	PTZ00121	<8..396	CDD:173412	27/126 (21%)
		Ape1-like_AP-endo	454..704	CDD:197321	118/258 (46%)
ARP	NP_181677.1	SAP	97..131	CDD:128789	8/33 (24%)
		Ape1-like_AP-endo	277..534	CDD:197321	118/257 (46%)