| Sequence 1: | NP_001137776.1 | Gene: | Rrp1 / 33500 | FlyBaseID: | FBgn0004584 | Length: | 706 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001034441.1 | Gene: | Nolc1 / 70769 | MGIID: | 1918019 | Length: | 702 | Species: | Mus musculus |
| Alignment Length: | 526 | Identity: | 125/526 - (23%) |
|---|---|---|---|
| Similarity: | 200/526 - (38%) | Gaps: | 148/526 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 PRVKAVKKQAEALASEPTDPTPNANGNGVDENADSAAEELKVPAKGKPRARKATKTAVSAE---- 62
Fly 63 ----------------------NSEEVEPQKAPTAAARGKKKQPK-------------------- 85
Fly 86 ------DTDENGQMEVVAKPKG--------------------RAKKATAEAEPEPKVDLPAGKAT 124
Fly 125 KPRAKKEPTPAPDEVTSSPPKG---RAKAEKPTNAQAKGRKRKELPAE--ANGGAEEAAEPPKQR 184
Fly 185 ARKEAVPTLKEQAEPGTISKEKVQKAETAAKRARGTKRLADSEIAAALDEPEVDE---VPPKAAS 246
Fly 247 KRAKKGKMVEPSPETVGDF-----QSVQEEVESPPKTAA------------APKKRAK------- 287
Fly 288 KTTNGETAVELEPKTKAKPT--KQRAKKEGKEPAP--GKKQKKSADKENGVVEEEAKPSTETKPA 348
Fly 349 KGRKKAPVKAEDVEDIEEAAEES--------KPARGRKKAAA-----KAEEPDVDEESGSKSMLA 400
Fly 401 EQSGCG 406 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rrp1 | NP_001137776.1 | RecX | 15..>217 | CDD:294607 | 61/278 (22%) |
| RR_TM4-6 | <314..>388 | CDD:283990 | 22/88 (25%) | ||
| Ape1-like_AP-endo | 454..704 | CDD:197321 | |||
| Nolc1 | NP_001034441.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 65..635 | 118/504 (23%) | |
| Nuclear localization signal. /evidence=ECO:0000255 | 69..83 | ||||
| 11 X 12 AA approximate repeats of an acidic serine cluster. /evidence=ECO:0000250|UniProtKB:Q14978 | 85..566 | 104/435 (24%) | |||
| Interaction with RPA194. /evidence=ECO:0000250|UniProtKB:Q14978 | 215..390 | 32/176 (18%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 392..590 | 61/212 (29%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 604..620 | 1/15 (7%) | |||
| SRP40_C | 627..693 | CDD:309939 | 7/29 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG2992 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||