Sequence 1: | NP_001137776.1 | Gene: | Rrp1 / 33500 | FlyBaseID: | FBgn0004584 | Length: | 706 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_074060.2 | Gene: | Nolc1 / 64896 | RGDID: | 621578 | Length: | 704 | Species: | Rattus norvegicus |
Alignment Length: | 426 | Identity: | 109/426 - (25%) |
---|---|---|---|
Similarity: | 177/426 - (41%) | Gaps: | 71/426 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 AVKKQAEALASEPTDPTPNANGNGVDENADSAAEELKVPAKGK--------PRARKATKTAVSAE 62
Fly 63 NSEEVEPQKAPT-----------AAARGKKKQPKDTDENGQMEVVAKPKGRAKKATAEAEPEPKV 116
Fly 117 DLPAGKATKP-RAKKEPTPAPDEVTSSPPKGRAKAEKPTNAQAKGRKRKELPAEANGGAEEAAEP 180
Fly 181 PKQRARKEAVPTLK----EQAEPGTISKEKVQKAETAAKRARGTKRLADSEIAAALDEPEVDEVP 241
Fly 242 PKAASKRAKKGKMVEPSP---------ETVGDFQSVQEEVESPPKTAAAPKKRAKK------TTN 291
Fly 292 GETAVELEPKTKAKPTKQRAKKEGKEPAPGKKQKKSADKENGVVEEEAK-----PSTETKPAKGR 351
Fly 352 KKAP-----VKAEDVEDIEEAAEESKPARGRKKAAA 382 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp1 | NP_001137776.1 | RecX | 15..>217 | CDD:294607 | 51/225 (23%) |
RR_TM4-6 | <314..>388 | CDD:283990 | 23/79 (29%) | ||
Ape1-like_AP-endo | 454..704 | CDD:197321 | |||
Nolc1 | NP_074060.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 65..638 | 102/403 (25%) | |
11 X 12 AA approximate repeats of an acidic serine cluster | 84..570 | 83/335 (25%) | |||
PHA03247 | <147..561 | CDD:223021 | 79/324 (24%) | ||
SRP40_C | 629..701 | CDD:398615 | 9/31 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2992 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |