Sequence 1: | NP_001137776.1 | Gene: | Rrp1 / 33500 | FlyBaseID: | FBgn0004584 | Length: | 706 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031746216.1 | Gene: | apex2 / 448512 | XenbaseID: | XB-GENE-1012054 | Length: | 546 | Species: | Xenopus tropicalis |
Alignment Length: | 336 | Identity: | 101/336 - (30%) |
---|---|---|---|
Similarity: | 150/336 - (44%) | Gaps: | 85/336 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 435 TTVTLDKDAFALPADKEF-NLKICSWNVAGLRAWLKKDGL-QLIDLEEPDIFCLQETKCANDQLP 497
Fly 498 EEVTRLPGYHPYWLCMPG--GYAGVAIY--SKIMPIHVEYGI--------------GN-EEF--- 540
Fly 541 -----DDVGRMITAEY---------EKFYLINVYVPNSG-----RKLVNLEPRMRWEKLFQAYVK 586
Fly 587 KLDALKP----VVICGDMNVSHMPI------DLENPKNNTKNAGFTQ--------EERDKMTELL 633
Fly 634 GLG----FVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYC-----LVSERFVPKVVEHEIR 689
Fly 690 SQCLGSDHCPI 700 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp1 | NP_001137776.1 | RecX | 15..>217 | CDD:294607 | |
RR_TM4-6 | <314..>388 | CDD:283990 | |||
Ape1-like_AP-endo | 454..704 | CDD:197321 | 96/316 (30%) | ||
apex2 | XP_031746216.1 | Ape2-like_AP-endo | 31..336 | CDD:197322 | 96/315 (30%) |
zf-GRF | 490..537 | CDD:399670 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |