Sequence 1: | NP_001137776.1 | Gene: | Rrp1 / 33500 | FlyBaseID: | FBgn0004584 | Length: | 706 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262195.1 | Gene: | Nopp140 / 40433 | FlyBaseID: | FBgn0037137 | Length: | 773 | Species: | Drosophila melanogaster |
Alignment Length: | 513 | Identity: | 138/513 - (26%) |
---|---|---|---|
Similarity: | 204/513 - (39%) | Gaps: | 119/513 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPRVKAV----------KKQAEALASEPTDPTPNANGNGVDENA-----DSAAEELKVP-AKGKP 49
Fly 50 RARKATKTAVSAENSEEVE-------PQKAPTAAARGKKKQPKDTDENGQMEVVAKPKGRAKKAT 107
Fly 108 AEAEPEPKVDLPAGKA-----TKPRAKKEPTPAPDEVTSS---------PPKGRAKAEKPTNAQA 158
Fly 159 KGRKRKELPAEANGGAEEAAEPPKQRARKEAVPTLK--EQAEPGTISKEKVQKAETAAK---RAR 218
Fly 219 GTKRLADSEIAAALDEPEVDEVPPKAASKRAKKGKMVEPSPETVGDFQSVQEEVESPPKTA---- 279
Fly 280 ----AAPKKRAKKTTNGETAVELEPK--------TKAKPTKQRAKKE---GKEPAPGK------- 322
Fly 323 ---KQKKSADKENGVVEEEAKPSTETKPAKGRKKAPVKAEDVEDIEEAAEESKPARGRKKA---A 381
Fly 382 AKAEEPDVDEESGSKSMLAEQSGCGGAAVLKSLQTMLNFCFPATKK----AKKAETKT 435 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp1 | NP_001137776.1 | RecX | 15..>217 | CDD:294607 | 63/233 (27%) |
RR_TM4-6 | <314..>388 | CDD:283990 | 28/89 (31%) | ||
Ape1-like_AP-endo | 454..704 | CDD:197321 | |||
Nopp140 | NP_001262195.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2992 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |