DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ts and Tyms

DIOPT Version :10

Sequence 1:NP_477367.1 Gene:Ts / 33499 FlyBaseID:FBgn0024920 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_062052.1 Gene:Tyms / 29261 RGDID:3921 Length:307 Species:Rattus norvegicus


Alignment Length:301 Identity:199/301 - (66%)
Similarity:237/301 - (78%) Gaps:3/301 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NGESPSKQQAPVNRDEMHYLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRV 85
            :|....:.:|| ...|:.||..:.||:..|.::.|||..|||||||.|.|:.:|:.|||||||||
  Rat    10 SGAQQPRTEAP-QHGELQYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRV 73

  Fly    86 FFRAVAEELLWFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGA 150
            |::.|.||||||:.|.|:||.|.:|.|.|||.|.||:|||.:||:.|..||||||||||||||||
  Rat    74 FWKGVLEELLWFIKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGA 138

  Fly   151 QYGTCDDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215
            .|...|.||||:|:|||::|||||:.||.||||||.||||.|:|.|||||||.|.||||  ..||
  Rat   139 DYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYV--VNGE 201

  Fly   216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLERT 280
            |||||||||.|||||||||||||||||:||||:|||:|||||||:||.|:||||:||||.||:|.
  Rat   202 LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQRE 266

  Fly   281 PRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321
            |||||||.|.|:|:.|:||:.|||||..|||||.|:|:|||
  Rat   267 PRPFPKLRILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TsNP_477367.1 PTZ00164 <33..321 CDD:240299 194/287 (68%)
TymsNP_062052.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 3/12 (25%)
PTZ00164 <21..307 CDD:240299 194/287 (68%)

Return to query results.
Submit another query.