DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ts and dhfr-1

DIOPT Version :10

Sequence 1:NP_477367.1 Gene:Ts / 33499 FlyBaseID:FBgn0024920 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_492364.1 Gene:dhfr-1 / 172681 WormBaseID:WBGene00007974 Length:189 Species:Caenorhabditis elegans


Alignment Length:197 Identity:35/197 - (17%)
Similarity:63/197 - (31%) Gaps:62/197 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 AVGDLGPVYGFQWRHFGAQYGTCDDDYSGKGIDQLRQVIDTIRNNPSDR----RIIM--SAWNPL 191
            |.|.:|......||                 |.:..|...::..|.||:    .::|  ..|..:
 Worm    12 AEGGIGKNGVLPWR-----------------IKKDMQYFASVTKNVSDQSKRNAVLMGRKCWESI 59

  Fly   192 DIPKMALPPCHCLAQFYVSEKRGELSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDF 256
            .:.:..|          .......||.||..:.:|          .|.::..:.|.:..|....|
 Worm    60 PVTRRPL----------AGRLNIVLSRQLPAQKSD----------DYIVVNSLEAAMKLLSEPPF 104

  Fly   257 VHT------MGDTHVY-LNHVEPLKEQLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPK 314
            |.:      :|...:| |...|.|.:::..|      .|.|....|:.      .:.:|::...|
 Worm   105 VDSIETIWNIGGAEIYDLALRENLVDEIHLT------RIFKNFEADVH------LKSLDFSKMEK 157

  Fly   315 IQ 316
            :|
 Worm   158 VQ 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TsNP_477367.1 PTZ00164 <33..321 CDD:240299 35/197 (18%)
dhfr-1NP_492364.1 DHFR 4..184 CDD:238127 35/197 (18%)

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