Protein Alignment Rbp9 and elavl3

DIOPT Version :9

• Sequence 1: NP_001259974.1
• Gene: Rbp9 / 33498
• FlyBaseID: FBgn0010263
• Length: 684
• Species: Drosophila melanogaster
• Sequence 2: XP_012808614.1
• Gene: elavl3 / 594912
• XenbaseID: XB-GENE-490864
• Length: 363
• Species: Xenopus tropicalis
• Alignment Length: 404
• Identity: 218/404 - (53%)
• Similarity: 263/404 - (65%)
• Gaps: 70/404 - (17%)

  Fly    51 TTATTTAAAGAGSTTNAAVGQATANNAASNNNNNNNNTNNNNNNNATANNNNNNEPDPKTNLIVN 115
            :|..|.|:.|.||     ||.....|.|::                          |.|||||||
 Frog     7 STMETQASNGPGS-----VGILNGTNGAAD--------------------------DSKTNLIVN 40

  Fly   116 YLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQNKT 180
            ||||.|:|:|.:|||.|.||:|||||:|||:|||||||||||||...||:||||.||||:||.||
 Frog    41 YLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKT 105

  Fly   181 IKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITG-LSKGVGFIRF 244
            ||||.|||||.||:.||||||.|||.|.|.::|.|||.||:|||||||.|.:|| :|:|||||||
 Frog   106 IKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRF 170

  Fly   245 DQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAG 309
            |:|.||:.|||.|||..|..::||||||||||||  :.:.|.|..::. |.|
 Frog   171 DKRIEAEEAIKGLNGQKPLGASEPITVKFANNPS--QKTGQALLTHLY-QTT------------- 219

  Fly   310 AAAAAAAAAIHPNAGRYS---------------SVISRYSPLTSDLITN--GM-IQGNTIASSGW 356
              |......:|....|:.               |.:.|:||:|.|.:||  |: :.|.|.|  ||
 Frog   220 --ARRYTGPLHHQTQRFRLDSLINMAYGVKSPLSFLPRFSPITIDSVTNLAGVSLTGPTTA--GW 280

  Fly   357 CIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYT 421
            |||||||:|:.:|:||||||||||||.:||||||..:||||||||||||||:||.:||.|||||.
 Frog   281 CIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYR 345

  Fly   422 LGNRVLQVSFKTNK 435
            ||:|||||||||:|
 Frog   346 LGDRVLQVSFKTSK 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	208/348 (60%)
		RRM1_Hu	109..186	CDD:241094	59/76 (78%)
		RRM2_Hu	196..274	CDD:241096	52/78 (67%)
		RRM3_Hu	355..432	CDD:240823	60/76 (79%)
elavl3	XP_012808614.1	ELAV_HUD_SF	32..362	CDD:273741	208/348 (60%)
		RRM1_Hu	34..111	CDD:241094	59/76 (78%)
		RRM_SF	116..206	CDD:302621	60/91 (66%)
		RRM3_HuC	279..363	CDD:241099	64/81 (79%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	121	1.000	Domainoid score	I5618
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	414	1.000	Inparanoid score	I1795
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm9409
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	9.070