Protein Alignment Rbp9 and mod

DIOPT Version :9

• Sequence 1: NP_001259974.1
• Gene: Rbp9 / 33498
• FlyBaseID: FBgn0010263
• Length: 684
• Species: Drosophila melanogaster
• Sequence 2: NP_001247401.1
• Gene: mod / 43764
• FlyBaseID: FBgn0002780
• Length: 542
• Species: Drosophila melanogaster
• Alignment Length: 365
• Identity: 66/365 - (18%)
• Similarity: 128/365 - (35%)
• Gaps: 122/365 - (33%)

  Fly    67 AAVGQATANNAASNNNNNNN-----NTNNN--------------NNNNATANNNNNNEPDPKTNL 112
            |..|:.:|....:|.|.|.:     :|:..              .:|..:.:...|.|.:.:..:
  Fly   196 AKFGRLSALQRFTNLNGNKSVLIAFDTSTGAEAVLQAKPKALTLGDNVLSVSQPRNKEENNERTV 260

  Fly   113 IVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQ 177
            :|..:...:::|::::.|.....||:..:..:::..::    ||.....:|..||:. |:...|.
  Fly   261 VVGLIGPNITKDDLKTFFEKVAPVEAVTISSNRLMPRA----FVRLASVDDIPKALK-LHSTELF 320

  Fly   178 NKTIKVSIARPSSESIKGAN---LYVSGLPKNMTQSD--LESLFSPYGKIITSRILCDNITGLSK 237
            ::.|  ::.|.|.|||...:   |.|..:.|:.:.|.  ||.:|..:|.:....::|      ||
  Fly   321 SRFI--TVRRISQESISRTSELTLVVENVGKHESYSSDALEKIFKKFGDVEEIDVVC------SK 377

  Fly   238 GV-GFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQNTRGGRA 301
            .| .|:.|.|...|.:|:.:|:|.|
  Fly   378 AVLAFVTFKQSDAATKALAQLDGKT---------------------------------------- 402

  Fly   302 FPANAAAGAAAAAAAAAIHPNAGRYSSVISRYSPLTSDLITNGMIQGNTIASSGWCIFVYNLAPD 366
                                 ..::...:.|:...|                ||..|.|.||..|
  Fly   403 ---------------------VNKFEWKLHRFERST----------------SGRAILVTNLTSD 430

  Fly   367 TEENVLWQLFGPFGAVQSV-----KVIRDLQSNK--CKGF 399
            ..|..|.::|...|.::|:     |.:...:.::  ||.|
  Fly   431 ATEADLRKVFNDSGEIESIIMLGQKAVVKFKDDEGFCKSF 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	56/306 (18%)
		RRM1_Hu	109..186	CDD:241094	13/76 (17%)
		RRM2_Hu	196..274	CDD:241096	20/83 (24%)
		RRM3_Hu	355..432	CDD:240823	15/52 (29%)
mod	NP_001247401.1	RRM_SF	177..244	CDD:302621	8/47 (17%)
		RRM_SF	260..327	CDD:240668	13/73 (18%)
		RRM_SF	342..411	CDD:240668	20/135 (15%)
		RRM_SF	422..>465	CDD:302621	11/42 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439652
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840