Sequence 1: | NP_001259974.1 | Gene: | Rbp9 / 33498 | FlyBaseID: | FBgn0010263 | Length: | 684 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
Alignment Length: | 472 | Identity: | 114/472 - (24%) |
---|---|---|---|
Similarity: | 170/472 - (36%) | Gaps: | 156/472 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 QQQQQ------QPSGAGGASGV-----------------------GSTTGSA-----------GG 33
Fly 34 PATANNVTNSQAQTNGGTTATTTAAAGAG------------------------STTNAAVGQATA 74
Fly 75 -----------------------------------------------------NNAASNNN---- 82
Fly 83 -------NNNNNTNNNNNNNATANNNN--NNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVES 138
Fly 139 CKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQNKTIKVSIARPSSESIKGANLYVSGL 203
Fly 204 PKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEP 268
Fly 269 ITVKFANNPSSNKN---------------SMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAA 318
Fly 319 IHPNAGRYSSVISRYSP 335 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp9 | NP_001259974.1 | ELAV_HUD_SF | 107..438 | CDD:273741 | 70/244 (29%) |
RRM1_Hu | 109..186 | CDD:241094 | 25/76 (33%) | ||
RRM2_Hu | 196..274 | CDD:241096 | 30/77 (39%) | ||
RRM3_Hu | 355..432 | CDD:240823 | |||
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 23/69 (33%) |
RRM2_MSSP | 322..400 | CDD:240690 | 31/85 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439598 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D614259at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.850 |