DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp9 and CG1316

DIOPT Version :9

Sequence 1:	NP_001259974.1	Gene:	Rbp9 / 33498	FlyBaseID:	FBgn0010263	Length:	684	Species:	Drosophila melanogaster
Sequence 2:	NP_647887.1	Gene:	CG1316 / 38526	FlyBaseID:	FBgn0035526	Length:	470	Species:	Drosophila melanogaster

Alignment Length:	372	Identity:	82/372 - (22%)
Similarity:	161/372 - (43%)	Gaps:	51/372 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   103 NNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKA 167
            :|:.||..:.:.....:..::::.|..|..:||:|...:::||.|.::.|..:|.:.|..||.||
  Fly    20 SNDDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKA 84

  Fly   168 INALNGLRL--QNKTIKVSIA--------RPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKI 222
            ...:||..:  .::|:||.:|        :..:|..|...|::. :||..|:.|:...||.:|.:
  Fly    85 QEEMNGKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLFIV-IPKTATEEDIREEFSQWGDV 148

  Fly   223 ITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNG------TTPKNSTEPITVKFANNPSSNK 281
            .:..|:.:...|..||.|::||.:.:.|..|.:..:.      ..||.||.....::......|
  Fly   149 ESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPKGSTRTQRDQYGRPSEDN- 212

  Fly   282 NSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYSPLTSDLITNGMI 346
                       |..:..||........|:::....:..:.|....|.        .:|:.....:
  Fly   213 -----------PLYSSSGRGNSNFNGGGSSSGGGGSNSYNNDWNVSQ--------NNDMAAFLRM 258

  Fly   347 QGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRD--LQSNKCKGFGFVTMTNYEE 409
            |...:|... |:.| |::....::.||:||.....:...:::|:  .::|:    ..|...|.|.
  Fly   259 QNVPVAQPS-CLEV-NVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNE----ALVVYDNPEA 317

  Fly   410 AVLAIQSLNG--YTLGNRVL-QVSFKTNKNKQTXLL---TKLAAVVN 450
            |:.|...|:|  |.:|.|:: :|:..::....|..:   ||..|:.|
  Fly   318 AIYAKDKLHGLEYPMGERIIVKVNGMSSARMDTSFIDKRTKKDAICN 364

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	76/351 (22%)
		RRM1_Hu	109..186	CDD:241094	20/78 (26%)
		RRM2_Hu	196..274	CDD:241096	21/83 (25%)
		RRM3_Hu	355..432	CDD:240823	20/81 (25%)
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	21/79 (27%)
		RRM2_RBM45	122..195	CDD:240813	17/73 (23%)
		RRM3_RBM45	267..339	CDD:240814	19/77 (25%)
		RRM4_RBM45	383..449	CDD:240815
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439656
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840