Sequence 1: | NP_001259974.1 | Gene: | Rbp9 / 33498 | FlyBaseID: | FBgn0010263 | Length: | 684 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_525123.2 | Gene: | hfp / 38173 | FlyBaseID: | FBgn0028577 | Length: | 637 | Species: | Drosophila melanogaster |
Alignment Length: | 470 | Identity: | 105/470 - (22%) |
---|---|---|---|
Similarity: | 173/470 - (36%) | Gaps: | 152/470 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 121 MSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQNKTIKVSI 185
Fly 186 ARPSS------------ESIKGAN-LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSK 237
Fly 238 GVGFIRFDQRFEADRAIKELN-------------GTTPKNSTE-PITVKFANNPSSNKNSMQPLA 288
Fly 289 AYI----APQNTRGGRAFPANA-----------AAGA-----------AAAAAAAAIHPNAGRYS 327
Fly 328 SVISRYSPLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFG-PFGAVQSVKVIRDL 391
Fly 392 QSNKCKGFGFVTMTNYEEAVLAIQSL----NGYTLGNRVLQVSFKTNKNKQTXLLTKLAAVVNAN 452
Fly 453 AAAAALAANGLVLHNHHHHSNIGSINNNSNNSNGCSAAAFPLGKYVNHSSNNRQHNINNSTSNTS 517
Fly 518 KQKPASTSNKQQSMA 532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp9 | NP_001259974.1 | ELAV_HUD_SF | 107..438 | CDD:273741 | 89/374 (24%) |
RRM1_Hu | 109..186 | CDD:241094 | 21/64 (33%) | ||
RRM2_Hu | 196..274 | CDD:241096 | 22/92 (24%) | ||
RRM3_Hu | 355..432 | CDD:240823 | 16/81 (20%) | ||
hfp | NP_525123.2 | half-pint | 10..637 | CDD:130706 | 105/470 (22%) |
RRM1_PUF60 | 130..205 | CDD:240816 | 21/65 (32%) | ||
RRM2_PUF60 | 227..303 | CDD:240817 | 17/75 (23%) | ||
RRM3_UHM_PUF60 | 536..636 | CDD:241092 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439573 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |