Protein Alignment Rbp9 and ssx

DIOPT Version :10

• Sequence 1: NP_001259974.1
• Gene: Rbp9 / 33498
• FlyBaseID: FBgn0010263
• Length: 684
• Species: Drosophila melanogaster
• Sequence 2: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 316
• Identity: 108/316 - (34%)
• Similarity: 154/316 - (48%)
• Gaps: 30/316 - (9%)

  Fly     8 VQQQQQQPSGAGGASGVGSTTGSAGGPATANNVTNSQAQTNGGTTATTTAAAGAGSTTNAAVGQA 72
            :|.|:.....:....|.|...|...|....::...:..|.|             |...|...||
  Fly     7 MQDQEHDDEQSSDIEGSGDNVGRDDGTDDDDDSNGNMQQEN-------------GDGGNGGDGQ- 57

  Fly    73 TANNAASNNNNNNNNTNNNNNNNATANNNNNNEPD--PKTNLIVNYLPQTMSQDEIRSLFVSFGE 135
                ..|.:...:::.:|..|:|:........:.|  ..||||:|||||.|:..|:.:||...|.
  Fly    58 ----EHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGP 118

  Fly   136 VESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQNKTIKVSIARPSSESIKGANLYV 200
            :.:||::||..||.|.|||||:|..:.|:|.||..|||..::||.:|||.|||..:|||..||||
  Fly   119 INTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYV 183

  Fly   201 SGLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNS 265
            ..|.:|:....|:.:|||||.|:...||.|.:||..:||.|:|:::|.||..|||.||.|.|:..
  Fly   184 INLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGG 248

  Fly   266 TEPITVKFANNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHP 321
            ::||.|:.|......|.:.  ..|.|...|..||...|.....|        .:||
  Fly   249 SQPIWVRLAEEHGKAKAAQ--FMAQIGGGNGGGGGGPPHMGPGG--------PMHP 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	92/217 (42%)
ssx	NP_569908.1	sex-lethal	<76..272	CDD:273740	85/197 (43%)