DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp9 and ssx

DIOPT Version :9

Sequence 1:	NP_001259974.1	Gene:	Rbp9 / 33498	FlyBaseID:	FBgn0010263	Length:	684	Species:	Drosophila melanogaster
Sequence 2:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster

Alignment Length:	316	Identity:	108/316 - (34%)
Similarity:	154/316 - (48%)	Gaps:	30/316 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 VQQQQQQPSGAGGASGVGSTTGSAGGPATANNVTNSQAQTNGGTTATTTAAAGAGSTTNAAVGQA 72
            :|.|:.....:....|.|...|...|....::...:..|.|             |...|...||
  Fly     7 MQDQEHDDEQSSDIEGSGDNVGRDDGTDDDDDSNGNMQQEN-------------GDGGNGGDGQ- 57

  Fly    73 TANNAASNNNNNNNNTNNNNNNNATANNNNNNEPD--PKTNLIVNYLPQTMSQDEIRSLFVSFGE 135
                ..|.:...:::.:|..|:|:........:.|  ..||||:|||||.|:..|:.:||...|.
  Fly    58 ----EHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGP 118

  Fly   136 VESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQNKTIKVSIARPSSESIKGANLYV 200
            :.:||::||..||.|.|||||:|..:.|:|.||..|||..::||.:|||.|||..:|||..||||
  Fly   119 INTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYV 183

  Fly   201 SGLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNS 265
            ..|.:|:....|:.:|||||.|:...||.|.:||..:||.|:|:::|.||..|||.||.|.|:..
  Fly   184 INLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGG 248

  Fly   266 TEPITVKFANNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHP 321
            ::||.|:.|......|.:.  ..|.|...|..||...|.....|        .:||
  Fly   249 SQPIWVRLAEEHGKAKAAQ--FMAQIGGGNGGGGGGPPHMGPGG--------PMHP 294

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	92/217 (42%)
		RRM1_Hu	109..186	CDD:241094	39/76 (51%)
		RRM2_Hu	196..274	CDD:241096	35/77 (45%)
		RRM3_Hu	355..432	CDD:240823
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	42/79 (53%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	35/77 (45%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439627
Domainoid	1	1.000	67	1.000	Domainoid score	I3499
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm1072
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.840