Protein Alignment Rbp9 and mug28

DIOPT Version :10

• Sequence 1: NP_001259974.1
• Gene: Rbp9 / 33498
• FlyBaseID: FBgn0010263
• Length: 684
• Species: Drosophila melanogaster
• Sequence 2: NP_593427.1
• Gene: mug28 / 2543165
• PomBaseID: SPAC343.07
• Length: 609
• Species: Schizosaccharomyces pombe
• Alignment Length: 627
• Identity: 119/627 - (18%)
• Similarity: 200/627 - (31%)
• Gaps: 224/627 - (35%)

  Fly    98 ANNNNNNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLI---RDKVTGQSLG--YGFVN 157
            :..|..:....:.::.|..||.|....::..||..||......::   ::|.|.....  :.|:.
pombe     8 SEKNKRSTKKCEISIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFIT 72

  Fly   158 YVKQEDAEKAINALNGLRLQNKTIKVSI------------------------------------- 185
            :..:..|:.||.:|||...|..|:||..
pombe    73 FENKCSADNAIASLNGSSFQGNTLKVEYTHIVERYKNKLENGVDQIHHSNNEKAKIRFSKIEKYT 137

  Fly   186 --ARPS-SE-----------SIKGANLYVSGLPKNMTQSDLESLFS-PYGKIITSRILCDNITGL 235
              .||: ||           |:..:||..|..||   ..|.|:.|: ..|..|.|
pombe   138 KETRPTVSEVRVSTKDKKEYSMNTSNLVQSNPPK---VHDKENAFAEATGTSILS---------- 189

  Fly   236 SKGVGFIRFDQRFEADRAIKEL-------NGTTP-----------KNSTEPITVKFA-------- 274
            ||.|..:......|.:.  |.|       :..||           :|:||.:.:|.|
pombe   190 SKAVQTLLVSDFTENEP--KHLSIRPNCKDNNTPSISNTFIEPYKENNTEHLHLKSAFEPCQMMP 252

  Fly   275 ------------NNPSSNKNSMQPLAAYIAP-------------------QNTRGGRAFPANAAA 308
                        :|||.....:..|...::|                   |:........|..|.
pombe   253 GMLLEQNPQFLYDNPSIFVIGILNLPLKVSPVELYNEFSNHGHILGVAINQSINEDMTHYAEVAV 317

  Fly   309 GA-----------AAAAAAAAI------------------HPNAGRYSS---------------V 329
            ..           .|.|...:|                  ||. |..::               |
pombe   318 STYESCIEIIEKFHAIAYEGSILQLFIKQPVQGFCSNLLNHPE-GTMTNLLPPNMEMPQPFEIPV 381

  Fly   330 ISRYSPLTSDLITNGMIQGN---TIASSGW-------C-IFVYNLAPDTEENV------LWQLFG 377
            |::.|.|.:..|:....|.:   |:..:..       | :||.||    ::|:      |.:||.
pombe   382 IAKTSALPNPFISFPSFQTSYETTVTPTPTSTPTIDPCNLFVKNL----DDNIVGNTQQLEELFS 442

  Fly   378 PFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNKNKQTXLL 442
            .||.::|..:.....:...||:|||:.::..|||.||.:|||...|.:.|.|::...:..:...|
pombe   443 KFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQAINTLNGVLFGKKRLFVNYAEKREDRKKRL 507

  Fly   443 TKLAA-----VVNANAAAAALAANGLVLHNHHHHSN--IGSINNNSNNS---------NGCSAAA 491
            :.:.:     ||.:.:....:|....:|..|.....  |.||..:..:.         :.|:|..
pombe   508 SAIFSQSYPPVVPSPSLTIPMATEPQILEYHQEWPQPLIQSIQQHGYSDPRQTLPTRLDSCAAKL 572

  Fly   492 FPLGKYVNHSSNNRQHNINNSTSNTSKQKPASTSNKQQSMAP 533
                         |:..|:|...|.|.:.....|..:.|::|
pombe   573 -------------REAVISNENLNPSHKFGIKHSTFKTSLSP 601

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	99/505 (20%)
mug28	NP_593427.1	RRM1_Mug28	19..102	CDD:410199	21/82 (26%)
		SF-CC1	<22..>192	CDD:273721	38/182 (21%)
		RRM2_Crp79_Mug28	272..345	CDD:410200	8/72 (11%)
		RRM3_Crp79_Mug28	416..507	CDD:410201	28/94 (30%)