Sequence 1: | NP_001259974.1 | Gene: | Rbp9 / 33498 | FlyBaseID: | FBgn0010263 | Length: | 684 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034617.1 | Gene: | Elavl3 / 15571 | MGIID: | 109157 | Length: | 367 | Species: | Mus musculus |
Alignment Length: | 358 | Identity: | 205/358 - (57%) |
---|---|---|---|
Similarity: | 247/358 - (68%) | Gaps: | 35/358 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 95 NATANNNNNNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYV 159
Fly 160 KQEDAEKAINALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIIT 224
Fly 225 SRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAA 289
Fly 290 YIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYS---------------SVISRYSPLTSD 339
Fly 340 LITN--GMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFV 402
Fly 403 TMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 435 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp9 | NP_001259974.1 | ELAV_HUD_SF | 107..438 | CDD:273741 | 203/346 (59%) |
RRM1_Hu | 109..186 | CDD:241094 | 58/76 (76%) | ||
RRM2_Hu | 196..274 | CDD:241096 | 53/77 (69%) | ||
RRM3_Hu | 355..432 | CDD:240823 | 60/76 (79%) | ||
Elavl3 | NP_034617.1 | ELAV_HUD_SF | 36..366 | CDD:273741 | 203/346 (59%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 121 | 1.000 | Domainoid score | I5668 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0145 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 420 | 1.000 | Inparanoid score | I1774 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1725 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D425303at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000313 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8744 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103306 | |
Panther | 1 | 1.100 | - | - | O | PTHR10352 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X326 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.780 |