DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lilli and aff3

DIOPT Version :9

Sequence 1:NP_001137775.1 Gene:lilli / 33496 FlyBaseID:FBgn0041111 Length:1673 Species:Drosophila melanogaster
Sequence 2:XP_031752871.1 Gene:aff3 / 100493499 XenbaseID:XB-GENE-1005828 Length:963 Species:Xenopus tropicalis


Alignment Length:1059 Identity:231/1059 - (21%)
Similarity:369/1059 - (34%) Gaps:300/1059 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   802 QRQKKPRKKKAITSA----------------------PILDSSDDDEPPPKHPGLDHTAVSVQTQ 844
            |:|.|...:|.:.||                      |:|..|..|.||      .:..||    
 Frog    13 QQQLKTSDRKMVGSATKDCIGGHQKCVMEKNKNCLLQPVLSPSSSDNPP------QNILVS---- 67

  Fly   845 PATDTVKKGRGRPRKQQQSGGSGNLSSASAGSSSQTKGPTLTAA-KKPLAKTPLAMSRARKREHS 908
                  .|.....|:..|...|..:|| ||..........|.|. :||.|..         |...
 Frog    68 ------NKNSSHRRQHPQLNCSLEISS-SAPCMQNFSATKLNAVQQKPTAYV---------RPMD 116

  Fly   909 SQSSSNGNTPTKKVATPQLVAAPL------KPTSNTAGSSSSDEDSSSSAESSSKSS----SSSS 963
            .|..:...:|..|.:|...:..||      |..|:...|...|..|:.:.|..:..|    ||..
 Frog   117 GQEQAVDESPKLKSSTEVNILLPLYRELCHKRVSDKIKSDEIDTCSNLNQEEENHLSNIGLSSKK 181

  Fly   964 SSDDTETQNTNCR--------IVKLNK------TGAVQKKAL---------------------LG 993
            ::|..:...|.|.        .:||:.      ..|||:::|                     |.
 Frog   182 NADFKDRSPTKCAPQISMLEDDLKLSSDEEDIDQQAVQEESLGVQSDSGEVQDLSKRTSGVSTLT 246

  Fly   994 SGSSSPS--SSGSEAEDQTTRSQVGSGQALAQQLPPYKQLPISQHSQ--------H------LSS 1042
            |.|||.|  ||.|::|.:::.|:....:| :..:.|..:.|.|...|        |      ||:
 Frog   247 SSSSSESDTSSESDSESESSSSEAECTKA-SGYISPEPEQPTSNKWQLDKWLNKVHPNKTVILSN 310

  Fly  1043 SDCSSSSGGCTAVCSSSSGEEDEGRREKERE---------RKPKSDKNKINTLTRIFNPKEGGAK 1098
            :.|.          |..|.:||.|..|...:         :..:.||...|..|.:.|.|:.|.|
 Frog   311 THCP----------SYGSLKEDAGNSENLSQICQSNHNCNKDTREDKRPWNICTDLGNNKDTGLK 365

  Fly  1099 KQGQVVIV------------DLQEEQQQGKLDAAAQPS---------APQAPPAAPAAI------ 1136
            ....:.|.            ..|.:....||....:.:         :|..|....|.:      
 Frog   366 SSASIEIAASIAVAVPTTESTFQRQPACRKLTRRTEQTSTGDKQNCYSPDEPSLNQATVGDNITE 430

  Fly  1137 MAKPRMTPT---------QQQQLGA------GLASPARTTTPHL--------TSLICKIDLSKLS 1178
            ..|.|:..|         :..:|||      ||...|..:...:        ..:..::::|.||
 Frog   431 QPKSRLLGTGRGLYKRDPRTSKLGAEIRRTRGLNRSASKSKEFIQFSSQSSDLGIETELEISALS 495

  Fly  1179 RERIMRLKKLTPAQQNGHLTPKDQATNAVHVPNGYAGDTNPAAKVKHEHPVKPEPELDAGYEAKF 1243
            ..     ...|||.:|.|.. |:...|.::..:....:|.....:        ..|||..|....
 Frog   496 TN-----TSATPATENNHRL-KEWGGNNINRASPCVANTTTTTDL--------AKELDEQYYTLV 546

  Fly  1244 KPGNVKQEFQLKQERDRDR---------------ERERE--------RERERERDRE-----REQ 1280
            ..|..:..|.:|...:...               |..:|        :|..|....:     .|:
 Frog   547 PFGRNENVFSIKGNDEVKSLWVRIDLTLLSRIPVELAQETLIMNTSMKEAHRSSTHKSFTSVAEK 611

  Fly  1281 PPGRRRKRSSSSSSSPYKEKKRKKEKADQLQMGKELLPVPVLLPSNNHERMPNHDRLSYDKLQL- 1344
            ...:.||:..|.:.:..:.||...||.:.||   |.:.......:|.|...|....:|..|..: 
 Frog   612 ALEKTRKKRKSENEASREVKKNHVEKDNCLQ---ETVLSDTFDMANLHSTNPIRTSMSESKSHVY 673

  Fly  1345 ---LHEDAAAVIGDVSAPNGSPTKKLLAMSPLPPPPTVTVAPATCNEAVQTTPPSATATSAIAPP 1406
               ||                                   .|:..:..:.|........|::  |
 Frog   674 QRSLH-----------------------------------VPSETSTLLHTEDVHLNLWSSL--P 701

  Fly  1407 VPATRLIYRSYFDRDVEHPSDDPRKNNQFLQEAINRKHAADLERDSFNQVTLYLEAVVYFLLTAD 1471
            .....|..:..||       :.||..:.|:|||...||.||...|.|::|..|.||.:.|:...:
 Frog   702 HGHKDLRSQMLFD-------NRPRSADYFMQEAKQMKHKADAMMDKFDKVLNYTEAALSFIECGN 759

  Fly  1472 AMERCSSE-QATNTMYKDTLSLIKFISTKFRPYQQQSTTNIQHETHNKVAILSLRCQSLISLKLY 1535
            |||....| ::..|||.:|:.||:: :.:.:.:...:.|:    ...|:..|..||.:|:..:::
 Frog   760 AMEHGPIESKSPYTMYAETVELIRY-ALRLKSHSGPNATS----QDKKITALCYRCLALLYWRMF 819

  Fly  1536 KLRRKDCRAIINSLTDFFR-------VGRGDIANGNT-----PSSISPS--NSVGSQGSGSNTPP 1586
            :|:|........:|.|:|:       ......:||.|     |:|.|||  :|||||||.||:..
 Frog   820 RLKRDHAVKYSKALIDYFKSSSKASQASSSQGSNGKTTGTPSPTSPSPSSVSSVGSQGSTSNSSI 884

  Fly  1587 GRIVPPDIHNMLCKQNEFLSYLNSAHELWDQADRLVRTGNHIDFIRELDHENGPLTLHSTMHEVF 1651
            ..| |..||.|........:.:..:::.|:.||.|  |.::.:|..|||...||:||||:|..:.
 Frog   885 ISI-PQRIHQMAANHVSITNSILHSYDYWEIADNL--TKDNQEFFNELDVLMGPITLHSSMEHLV 946

  Fly  1652 RYVQAGLKTLRDAVSHPTH 1670
            :|.:.||..:|    |..|
 Frog   947 QYTRQGLHWVR----HSAH 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lilliNP_001137775.1 AF-4 <1435..1662 CDD:282905 77/241 (32%)
aff3XP_031752871.1 AF-4 <1..298 CDD:398672 68/311 (22%)
AF-4_C 708..963 CDD:408646 84/273 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 143 1.000 Inparanoid score I4359
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001371
OrthoInspector 1 1.000 - - otm48947
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

Return to query results.
Submit another query.