DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prx6a and PER1

DIOPT Version :10

Sequence 1:NP_523463.2 Gene:Prx6a / 33493 FlyBaseID:FBgn0031479 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_175247.1 Gene:PER1 / 841231 AraportID:AT1G48130 Length:216 Species:Arabidopsis thaliana


Alignment Length:216 Identity:99/216 - (45%)
Similarity:134/216 - (62%) Gaps:8/216 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LNIGDQFPNFTAETSEGRIDFYDWMQDSWAILFSHPADFTPVCTTELSRVAALIPEFQKRGVKPI 70
            :.:||..||...||:..:...:|:..:||.:|||||.||||||||||..:|....||.|||||.:
plant     4 ITLGDTVPNLEVETTHDKFKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLL 68

  Fly    71 ALSCDTVESHKGWIEDIKSFGKLSSFDYPIIADDKRELALKFNMLDKDEINAEGIPLTCRAVFVV 135
            .||||.|:|||.||:||::|...|..:||||||..:|:..:.||:|..|....      ||:.:|
plant    69 GLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPS------RALHIV 127

  Fly   136 DDKKKLRLSILYPATTGRNFDEILRVIDSLQLT--QTKSVATPADWKQGGKCMVLPTVKAEDVPK 198
            ....|::||.|||:|||||.||:||.:|||.:.  ....:|||.:||.....::.|.|..|:..|
plant   128 GPDSKIKLSFLYPSTTGRNMDEVLRALDSLLMASKHNNKIATPVNWKPDQPVVISPAVSDEEAKK 192

  Fly   199 LFPDGIETIELPSGKSYLRIT 219
            :||.|.:|.:|||.|.|||.|
plant   193 MFPQGFKTADLPSKKGYLRHT 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx6aNP_523463.2 PRX_1cys 8..220 CDD:239314 99/214 (46%)
PER1NP_175247.1 PRX_1cys 6..214 CDD:239314 99/214 (46%)

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