DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prx6005 and prdx-2

DIOPT Version :9

Sequence 1:NP_523463.2 Gene:Prx6005 / 33493 FlyBaseID:FBgn0031479 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001300536.1 Gene:prdx-2 / 266858 WormBaseID:WBGene00006434 Length:201 Species:Caenorhabditis elegans


Alignment Length:189 Identity:56/189 - (29%)
Similarity:89/189 - (47%) Gaps:12/189 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IGDQFPNF-TAETSEGR---IDFYDWMQDSWAILFSHPADFTPVCTTELSRVAALIPEFQKRGVK 68
            ||...|.| |....:|.   :...|: :..:.:||.:|.|||.||.||:...:....||:.....
 Worm    12 IGKPAPQFKTQAVVDGEFVDVSLSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAINTV 75

  Fly    69 PIALSCDTVESHKGWIEDIKSFGKLSSFDYPIIADDKRELALKFNMLDKDEINAEGIPLTCRAVF 133
            .:|.|.|:|.||..||...:..|.|...:.|::||...:::..:.:|.:|    |||..  |.:|
 Worm    76 VLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKED----EGIAF--RGLF 134

  Fly   134 VVDDKKKLRLSILYPATTGRNFDEILRVIDSLQLTQTKSVATPADWKQGGKCMVLPTVK 192
            ::|..:.||...:.....||:.||.||::.:.|..:......||.|..|.. .:.|.||
 Worm   135 IIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSD-TIKPGVK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx6005NP_523463.2 PRX_1cys 8..220 CDD:239314 56/189 (30%)
AhpC 8..198 CDD:223527 56/189 (30%)
prdx-2NP_001300536.1 PRX_Typ2cys 12..183 CDD:239313 52/177 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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