DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prx6005 and Prdx1

DIOPT Version :9

Sequence 1:NP_523463.2 Gene:Prx6005 / 33493 FlyBaseID:FBgn0031479 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_035164.1 Gene:Prdx1 / 18477 MGIID:99523 Length:199 Species:Mus musculus


Alignment Length:203 Identity:68/203 - (33%)
Similarity:98/203 - (48%) Gaps:18/203 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGKALNIGDQFPNF--TAETSEGR---IDFYDWMQDSWAILFSHPADFTPVCTTELSRVAALIP 60
            ||.....||...|||  ||...:|:   |...:: :..:.:.|.:|.|||.||.||:...:....
Mouse     1 MSSGNAKIGYPAPNFKATAVMPDGQFKDISLSEY-KGKYVVFFFYPLDFTFVCPTEIIAFSDRAD 64

  Fly    61 EFQKRGVKPIALSCDTVESHKGWIEDIKSFGKLSSFDYPIIADDKRELALKFNMLDKDEINAEGI 125
            ||:|...:.|..|.|:...|..||...|..|.|...:.|:|:|.||.:|..:.:|..|    |||
Mouse    65 EFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLISDPKRTIAQDYGVLKAD----EGI 125

  Fly   126 PLTCRAVFVVDDKKKLRLSILYPATTGRNFDEILRVIDSLQLTQTKSVATPADWKQGGKCMVLPT 190
              :.|.:|::|||..||...:.....||:.|||:|::.:.|.|.......||.||.|.     .|
Mouse   126 --SFRGLFIIDDKGILRQITINDLPVGRSVDEIIRLVQAFQFTDKHGEVCPAGWKPGS-----DT 183

  Fly   191 VKAEDVPK 198
            :| .||.|
Mouse   184 IK-PDVNK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx6005NP_523463.2 PRX_1cys 8..220 CDD:239314 66/196 (34%)
AhpC 8..198 CDD:223527 65/194 (34%)
Prdx1NP_035164.1 PRX_Typ2cys 8..180 CDD:239313 60/178 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

Return to query results.
Submit another query.