DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2991 and Marchf1

DIOPT Version :9

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_006509817.1 Gene:Marchf1 / 72925 MGIID:1920175 Length:453 Species:Mus musculus


Alignment Length:166 Identity:45/166 - (27%)
Similarity:72/166 - (43%) Gaps:30/166 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 PEQLWILNPRKLLSR---QIDPSIPTLNA-ETNKLSPEEGQSFLTKKD---------------CW 393
            |:.|..||.::.:.:   :.|.:...|.| |.::...:.|....|...               |.
Mouse   181 PQLLHTLNQKETIKKRFSETDFNTEILAAVERDECGEDTGLQLNTSTQKPPAAYDDGSDNFEVCR 245

  Fly   394 ICY-DSDKPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQLSCKVCGHPYEIE-KSKKL-E 455
            ||: :.|:..|||.||||||.:..||..||.:|:..|.:.     .|::|.:.:.:| |.|.| :
Mouse   246 ICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTR-----CCELCKYDFIMETKLKPLRK 305

  Fly   456 WDK-GFTIQHWSKTVILITLMCVTGATAWVVIQMYV 490
            |:| ..|.....|....:|...:  |...||..:||
Mouse   306 WEKLQMTTSERRKIFCSVTFHVI--AVTCVVWSLYV 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 35/121 (29%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 20/51 (39%)
Marchf1XP_006509817.1 RING_CH-C4HC3_MARCH1_like 243..294 CDD:319612 21/55 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.