DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and marchf4b

DIOPT Version :10

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001025336.1 Gene:marchf4b / 562065 ZFINID:ZDB-GENE-041210-304 Length:378 Species:Danio rerio


Alignment Length:220 Identity:49/220 - (22%)
Similarity:90/220 - (40%) Gaps:53/220 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 SFLTKKD----CWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQLSCKVCGHP 445
            ||::..:    |.||:...:...|:.||||:|.|.|.|..||.:|:.|     ....:|::|.:.
Zfish    97 SFISYAEGTPVCRICFQGPEKGELLSPCRCSGSVRSTHQPCLIKWISE-----RGSWTCELCYYK 156

  Fly   446 YE---IEKSKKLEWDKGFTIQHWSKTVI--------LITLMCVTGATAWVV-------IQMYVDP 492
            |:   |.....|:|      |..|.|||        ::..:.:..:.:|:|       .:.....
Zfish   157 YQVIAISTKNPLQW------QAISLTVIEKVQIAAAILGSLFLIASISWLVWSSLSPSAKWQRQD 215

  Fly   493 LVRVMTVGIAVLIGYVCVKCL---GENTVVAY-------QRAKVSSINIVTSSEMEK-----LHT 542
            |:..:..|:...:..||:..:   |.:....:       |:.||.:.:....||.:|     ..|
Zfish   216 LLFQICYGMYGFMDVVCIALIVHEGPSVFRIFHRWQAVNQQWKVLNYDKKRDSEQQKSSEEQTQT 280

  Fly   543 ICEE-----VSASTSAEAVRAGAAS 562
            :.::     .:.|.|..::.|.|||
Zfish   281 LVQQRENTGSNISPSLSSILAAAAS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 29/126 (23%)
RING_CH-C4HC3_MARCH 392..443 CDD:438158 17/50 (34%)
marchf4bNP_001025336.1 RING_CH-C4HC3_MARCH4_9 108..157 CDD:319725 18/53 (34%)

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