DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and march2

DIOPT Version :9

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001038255.2 Gene:march2 / 555611 ZFINID:ZDB-GENE-050208-777 Length:249 Species:Danio rerio


Alignment Length:189 Identity:44/189 - (23%)
Similarity:79/189 - (41%) Gaps:47/189 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 CCLWNSMAPEQLWILNPRKLLSRQIDPS-------IPTLNAETNKLSPEEGQSFLTKKD---CWI 394
            ||    ..|..|........||:.::.:       :..:.|:..:|.....::..|:.|   |.|
Zfish     6 CC----HLPGSLCDCTGNAALSKTVEEADNRRAQYVTQVTAKDGRLLSTVIKALGTQSDRPTCRI 66

  Fly   395 CYDSD---KPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQLSCKVCGHPYEIEKSKK--L 454
            |::..   ..|.|:.||.|||.:.:||..||::||  |.||:.   .|::|...:.||:..:  .
Zfish    67 CHEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEKWL--SSSNTS---YCELCHTEFTIERRPRPLT 126

  Fly   455 EW--DKGFTIQHWSKTVILITLMCVTGATAWVVIQMYVDPLVRVMTVGIAVLIGYVCVK 511
            ||  |.|   ....|..:...::|.          :::.||        |.:.|::|::
Zfish   127 EWLRDPG---PRNEKRTLFCDMVCF----------LFITPL--------AAISGWLCLR 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 31/114 (27%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 20/53 (38%)
march2NP_001038255.2 RINGv 64..113 CDD:128983 20/53 (38%)
Vpu 176..>220 CDD:109608
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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