DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2991 and marchf3

DIOPT Version :10

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001007499.1 Gene:marchf3 / 493225 XenbaseID:XB-GENE-491983 Length:251 Species:Xenopus tropicalis


Alignment Length:134 Identity:41/134 - (30%)
Similarity:68/134 - (50%) Gaps:21/134 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 QSFLTKKDCWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQLSCKVCGHPYEI 448
            |||..:..|.||::....|.|:.||.|||.:.::|..||:.||  |.||:.   .|::|...:.:
 Frog    61 QSFNDRPMCRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWL--SSSNTS---YCELCHFRFSV 120

  Fly   449 EKSKK--LEWDKGFTIQHWSKTV-------ILIT-LMCVTGATAWVVIQMYVDPL---VRVMTVG 500
            |:..:  :||.:....||..:|:       :.|| |..::|   |:.::..||.|   .|:..||
 Frog   121 ERKPRPLVEWLRNPGPQHEKRTLFGDMVCFLFITPLATISG---WLCLRGAVDHLHFSSRLEAVG 182

  Fly   501 IAVL 504
            :..|
 Frog   183 LIAL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 34/117 (29%)
RING_CH-C4HC3_MARCH 392..443 CDD:438158 19/50 (38%)
marchf3NP_001007499.1 RING_Ubox 63..118 CDD:473075 21/59 (36%)

Return to query results.
Submit another query.