DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and Marchf1

DIOPT Version :10

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_017455664.2 Gene:Marchf1 / 361135 RGDID:1305148 Length:542 Species:Rattus norvegicus


Alignment Length:135 Identity:45/135 - (33%)
Similarity:68/135 - (50%) Gaps:19/135 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 IDPSIPTLNAETNKLSP---EEG-QSFLTKKDCWICY-DSDKPEPLIQPCRCTGDVSSVHHECLK 423
            :|.|...||..|.| ||   ::| ::|   :.|.||: :.|:..|||.||||||.:..||..||.
  Rat   305 VDGSGLQLNTSTQK-SPGADDDGSENF---EVCRICHCEGDEESPLITPCRCTGTLRFVHQSCLH 365

  Fly   424 RWLVESCSNSEAQLSCKVCGHPYEIE-KSKKL-EWDK-GFTIQHWSKTVILITLMCVTGATAWVV 485
            :|:..|.:.     .|::|.:.:.:| |.|.| :|:| ..|.....|....:|...:  |...||
  Rat   366 QWIKSSDTR-----CCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVI--AVTCVV 423

  Fly   486 IQMYV 490
            ..:||
  Rat   424 WSLYV 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 35/106 (33%)
RING_CH-C4HC3_MARCH 392..443 CDD:438158 20/51 (39%)
Marchf1XP_017455664.2 RING_Ubox 331..396 CDD:473075 25/69 (36%)

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