DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and CG16781

DIOPT Version :9

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001259211.1 Gene:CG16781 / 31315 FlyBaseID:FBgn0029661 Length:386 Species:Drosophila melanogaster


Alignment Length:128 Identity:28/128 - (21%)
Similarity:51/128 - (39%) Gaps:44/128 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 AETNKLSPEEGQSFLTKKDCWICYDSDKPEP---LIQPCRCTGDVSSVHHECLKRWLVESCSNSE 434
            ::.::||..:|:     :.||||:.:.:..|   .:|||:|.||...||..||.||:.|......
  Fly    30 SQHSELSNADGE-----RICWICFATSEDNPHAHWVQPCQCRGDTKWVHQSCLYRWIDEKQLGDR 89

  Fly   435 AQLSCKVCGHPYEIEKSKKLEWDKGFTIQHWSKTVILITLMCVTGATAWVVIQMYVDPLVRVM 497
            .|                                    |::|....|.::::...::|:.||:
  Fly    90 RQ------------------------------------TVICQQCQTEYIMVFPQMNPIARVL 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 23/107 (21%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 19/53 (36%)
CG16781NP_001259211.1 RINGv 43..99 CDD:128983 21/91 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1210654at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.010

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