DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and Marchf6

DIOPT Version :9

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_008759048.1 Gene:Marchf6 / 294862 RGDID:1565757 Length:914 Species:Rattus norvegicus


Alignment Length:199 Identity:43/199 - (21%)
Similarity:67/199 - (33%) Gaps:64/199 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 CWICYDSDKPE-PLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQLSCKVCGHP------YEIE 449
            |.:|.....|| ||..||.|||.:..:|.|||.:||..|     .:..|::|.|.      |..:
  Rat     9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHS-----RKEYCELCKHRFAFTPIYSPD 68

  Fly   450 KSKKLEWDK---------GFTIQHWSKTVILITLMCVTGATAWVVIQMYVDPLVRVMTVGIAVLI 505
            ...:|....         |..|::|....::        |.||               :|:..|.
  Rat    69 MPSRLPIQDIFAGLVTSIGTAIRYWFHYTLV--------AFAW---------------LGVVPLT 110

  Fly   506 GYVCVKCLGENTVVAYQRAKVSSIN-------------IVTSSEMEKLHTICEEVSASTSAEAVR 557
            .....|||...:|.:.....:..::             :||.       |:|..:|.....|.:.
  Rat   111 ACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTC-------TLCAFISLVWLREQIV 168

  Fly   558 AGAA 561
            .|.|
  Rat   169 HGGA 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 29/117 (25%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 19/51 (37%)
Marchf6XP_008759048.1 RING_CH-C4HC3_MARCH6 8..57 CDD:319616 20/52 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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