DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and marc-2

DIOPT Version :9

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_496302.2 Gene:marc-2 / 183961 WormBaseID:WBGene00008433 Length:206 Species:Caenorhabditis elegans


Alignment Length:212 Identity:57/212 - (26%)
Similarity:90/212 - (42%) Gaps:67/212 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 NAETNKLSPEEGQSFLTKKD--CWICYDSD-KPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNS 433
            |.||.: ||:|    ::.|.  |.||:|:| ..:.||:||.|:|.|:.||:.||::| |.:.|| 
 Worm     8 NLETIR-SPKE----VSTKTVICRICFDNDTSSDSLIKPCSCSGTVAYVHNGCLEQW-VRTTSN- 65

  Fly   434 EAQLSCKVCGHPYEIEKSKKLEWDKGFTIQHWSKTVILITL----------MCVTGAT-AWVVIQ 487
               :.|.:|...:|:..:...:|:|             |||          ....|.| ||||..
 Worm    66 ---IQCTICQDMFELIPAGLKDWNK-------------ITLPRPLSEQLEDYMEFGCTLAWVVYM 114

  Fly   488 M---YV-------DPLVRV-MTVGIAVL--------------IGYVCV----KCLGENTVVAYQ- 522
            :   ||       ..:..| |.:|..::              .|.:|.    |.|.:||:..:: 
 Worm   115 LRFAYVGLRYGSRSMIENVDMAIGTGMMRSFWWMTFWFNFLYYGAMCFVFFEKWLIDNTIFKFKD 179

  Fly   523 RAKVSSINIVTSSEMEK 539
            |:...|..|..:|...|
 Worm   180 RSGSPSSQISIASRSSK 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 37/128 (29%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 21/51 (41%)
marc-2NP_496302.2 RINGv 24..72 CDD:128983 21/52 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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