DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG2991 and marchf11

DIOPT Version :9

Sequence 1:	NP_608725.1	Gene:	CG2991 / 33488	FlyBaseID:	FBgn0031474	Length:	562	Species:	Drosophila melanogaster
Sequence 2:	XP_002933170.1	Gene:	marchf11 / 100487933	XenbaseID:	XB-GENE-982895	Length:	287	Species:	Xenopus tropicalis

Alignment Length:	153	Identity:	36/153 - (23%)
Similarity:	69/153 - (45%)	Gaps:	29/153 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   392 CWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQLSCKVCGHPYE---IEKSKK 453
            |.||:...:...|:.||||.|.|...|..||.:|:.|     ....:|::|.:.|:   |...:.
Frog    54 CKICFQGPEQGELLNPCRCDGSVRYTHQLCLLKWISE-----RGSWTCELCCYRYQVIAIRMKRP 113

  Fly   454 LEWDKGFTIQHWSK----TVILITLMCVTGATAWVV--------IQMYVDPLVRVMTVGIAVLIG 506
            .:| :..|:....|    .|||.:|..::..| |::        :....|.|.:: ..|   :.|
Frog   114 CQW-QCITVTLVEKVQMIAVILGSLFLISSVT-WLLWSAFSPQAVWQRKDILFQI-CYG---MYG 172

  Fly   507 YVCVKCLGENTVVAYQRAKVSSI 529
            ::.:.|:|   ::.::.|.|.::
Frog   173 FMDLVCIG---LIVHEGAAVYTV 192

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG2991	NP_608725.1	SSM4	389..>494	CDD:227510	29/116 (25%)
CG2991	NP_608725.1	RING_CH-C4HC3_MARCH	392..443	CDD:319409	16/50 (32%)
marchf11	XP_002933170.1	RING_Ubox	54..103	CDD:388418	17/53 (32%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910