DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and marchf5

DIOPT Version :9

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001116950.1 Gene:marchf5 / 100144728 XenbaseID:XB-GENE-946356 Length:283 Species:Xenopus tropicalis


Alignment Length:162 Identity:40/162 - (24%)
Similarity:72/162 - (44%) Gaps:32/162 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 AETNKLSPEEGQSFLTKKDCWICY---DSDKPEPLIQPCRCTGDVSSVHHECLKRWLVE-SCSNS 433
            :|.|.:|.::    :..:.||:|:   :.|:....::||||.|....||..||:||:.| ...||
 Frog     2 SEANSVSVQQ----MLDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNS 62

  Fly   434 EAQLSCKVCGHPYEIE-----------------KSKKLEW-DKGFTIQ--HWSK-TVILITLMCV 477
            .|:::|..|...|.|.                 .||...: ..|..:.  :|:. |...:|:|.|
 Frog    63 TARVACPQCNAEYLIVFPNLGPVVYVLDLADRLISKACPFAAAGIMVGSIYWTAVTYGAVTVMQV 127

  Fly   478 TGATAWVVIQMYVDP---LVRVMTVGIAVLIG 506
            .|....:.:....||   |:.:.|:.:.:::|
 Frog   128 VGHKEGLDVMERADPLFLLIGLPTIPVVLILG 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 34/132 (26%)
RING_CH-C4HC3_MARCH 392..443 CDD:319409 20/54 (37%)
marchf5NP_001116950.1 RING_CH-C4HC3_MARCH5 15..75 CDD:319615 21/59 (36%)
RING-CH finger (C4HC3-type) 17..71 CDD:319615 20/53 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1210654at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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