DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2991 and marchf4a

DIOPT Version :10

Sequence 1:NP_608725.1 Gene:CG2991 / 33488 FlyBaseID:FBgn0031474 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001038876.1 Gene:marchf4a / 100000640 ZFINID:ZDB-GENE-060825-323 Length:421 Species:Danio rerio


Alignment Length:366 Identity:70/366 - (19%)
Similarity:112/366 - (30%) Gaps:159/366 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 IGVALWFPCCLWNSMAPEQLWILNPRKLLSRQ------------------IDPSIPT-------- 370
            |||.:|   | |.        :|:.|.:|.||                  :.|..|:        
Zfish     5 IGVIVW---C-WG--------LLSRRPMLRRQGKQKGRCCVLFSDLEVFLLRPPTPSASPPAFTP 57

  Fly   371 ---LNAETNKLS--------------PEEGQSFLTKKD--------------------------- 391
               ||||.|..|              |..|:..|..:.                           
Zfish    58 MNELNAEGNATSSATESHSLANGHYQPVTGEEALDTRGPDDWTHSVVDPPRTLDCCSSSEDCSKE 122

  Fly   392 --------------------CWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVESCSNSEAQ 436
                                |.||:...:...|:.||||:|.|...|..||.:|:.|     ...
Zfish   123 KLDERLSLNSCTDSGVRTPLCRICFQGPEQGELLSPCRCSGSVRCTHEPCLIKWISE-----RGS 182

  Fly   437 LSCKVCGHPYE---IEKSKKLEWDKGFTIQHWSKTVI--------LITLMCVTGATAWVVIQMYV 490
            .||::|.:.|:   |.....|:|      |..|.|||        ::..:.:..:.:|:|... :
Zfish   183 WSCELCYYKYQVIAISTKNPLQW------QAISLTVIEKVQIAAAVLGSLFLIASISWLVWSS-L 240

  Fly   491 DPLVRVMTVGIAVLIGY--------VCVKCL---GENT---------------VVAYQRAKVSSI 529
            .|..:.....:...|.|        ||:..:   |.:.               |:.|.:.|.:..
Zfish   241 SPSAKWQRQDLLFQICYAMYGFMDLVCIALIVHEGPSVFRIFNRWQAVNQQWKVLNYDKVKDNED 305

  Fly   530 NIVTSSEMEKL-----HTICE---EVSASTSAEAVRAGAAS 562
            :..|.:....|     |.:.:   |...|||..::.|.||:
Zfish   306 HQKTGATFRTLSLPLTHRMGQSGPEGEPSTSTSSLMAAAAA 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2991NP_608725.1 SSM4 389..>494 CDD:227510 30/162 (19%)
RING_CH-C4HC3_MARCH 392..443 CDD:438158 17/50 (34%)
marchf4aNP_001038876.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..79 6/18 (33%)
RING_CH-C4HC3_MARCH4 137..192 CDD:438473 18/59 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..385 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..421
Blue background indicates that the domain is not in the aligned region.

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