DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3104 and Rnasel

DIOPT Version :9

Sequence 1:NP_001259969.1 Gene:CG3104 / 33486 FlyBaseID:FBgn0031473 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_038946794.1 Gene:Rnasel / 359726 RGDID:727933 Length:743 Species:Rattus norvegicus


Alignment Length:311 Identity:88/311 - (28%)
Similarity:145/311 - (46%) Gaps:40/311 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DVQLHMAAMRGDEVALLRVLDSGKVHVDCKDEDGTTPLILAAAGGHTYCVMELLDQGADPNSRRL 74
            |..|..|..:||...:.::|:.|.....|::..|.|||..|...|....|..||..||||:.|:.
  Rat    26 DYLLIEAVNKGDADRVQQLLEQGADANVCEESGGWTPLHNAVQSGRVDIVNLLLRYGADPHRRKK 90

  Fly    75 TGTTPLFFAAQGGHLDVVKILIKAGASVDTPSADGGTPLFVACQGGHVKIVRELLDCGANVNAH- 138
            .|.||...|...|.:.:::|.:..||:::.....|.|....|.:.|:|:.::.|...||:||.. 
  Rat    91 NGATPFIIAGICGDVSLLQIFLSRGANINERDMHGFTAFMEAAEYGNVEALKFLFAEGADVNLRR 155

  Fly   139 --MKDR-------ATPVFISAQNGHRTVLSLLI-QAGAEIDIKRIDGATPLWIAAQMGQD----- 188
              .:||       ||.:..:|:|||..|:.:|: :..||.|.:...|...| |.:.:.:|     
  Rat   156 ETTEDRRRLKQGGATALMSAAENGHPEVVRILLDEMKAEADARDNMGRNAL-IRSLLNRDCENVE 219

  Fly   189 ----HICKVLLQNGANVDTVRCDG-ATPLFKAAHKGHAAVITVLLKYRPNLGQLPN-----GESA 243
                .|..||:|.||::: ||.:| .|||..|..:.|..::.:||...   |...|     |::|
  Rat   220 IHVEEITSVLIQYGADIN-VRGEGEKTPLISAVERKHTGLVQMLLSQE---GIKVNDRDSEGKTA 280

  Fly   244 LHAAAMFGHMTVCKQLVAAGSD--------VLLKNHD-GLTALQLAHQQKY 285
            |..|.......:.:.|:..|:|        :..:|:| ||..|.|:::..:
  Rat   281 LQIAVELKLKEIVRLLLEKGADTKCGDLVWIAKRNYDHGLVKLLLSYEANH 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3104NP_001259969.1 Ank_2 <13..72 CDD:289560 20/58 (34%)
ANK repeat 13..40 CDD:293786 7/26 (27%)
ANK 37..162 CDD:238125 42/134 (31%)
ANK repeat 42..73 CDD:293786 13/30 (43%)
Ank_2 47..137 CDD:289560 28/89 (31%)
ANK repeat 75..106 CDD:293786 8/30 (27%)
ANK 103..228 CDD:238125 41/145 (28%)
ANK repeat 108..137 CDD:293786 9/28 (32%)
Ank_2 113..202 CDD:289560 31/108 (29%)
ANK repeat 141..171 CDD:293786 13/37 (35%)
ANK 169..292 CDD:238125 36/141 (26%)
ANK repeat 174..204 CDD:293786 10/38 (26%)
Ank_2 179..270 CDD:289560 28/113 (25%)
ANK repeat 207..237 CDD:293786 9/30 (30%)
ANK repeat 239..270 CDD:293786 8/43 (19%)
RnaselXP_038946794.1 PHA02875 29..>188 CDD:165206 48/158 (30%)
ANK repeat 29..55 CDD:293786 6/25 (24%)
ANK repeat 59..89 CDD:293786 13/29 (45%)
ANK repeat 91..122 CDD:293786 8/30 (27%)
ANK repeat 124..153 CDD:293786 9/28 (32%)
ANK repeat 167..199 CDD:293786 11/31 (35%)
Ank_4 170..216 CDD:372654 14/46 (30%)
ANK repeat 201..239 CDD:293786 10/39 (26%)
Ank_2 224..302 CDD:403870 24/81 (30%)
ANK repeat 242..274 CDD:293786 10/34 (29%)
PTZ00322 259..>369 CDD:140343 17/76 (22%)
ANK repeat 276..301 CDD:293786 5/24 (21%)
PKc_like 379..590 CDD:419665
RNase_RNase-L 599..715 CDD:199218
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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