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Protein Alignment CG3104 and cact

DIOPT Version :10

Sequence 1:	NP_608724.1	Gene:	CG3104 / 33486	FlyBaseID:	FBgn0031473	Length:	321	Species:	Drosophila melanogaster
Sequence 2:	NP_476942.1	Gene:	cact / 34969	FlyBaseID:	FBgn0000250	Length:	500	Species:	Drosophila melanogaster

Alignment Length:	266	Identity:	70/266 - (26%)
Similarity:	109/266 - (40%)	Gaps:	47/266 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    39 KDEDGTTPLILAAAGGHTYCVMELLDQGADP---NSRRLTGTTPLFFAAQGGHLDVVKILIKAGA 100
            :::||.|||.||...|....|..|:.....|   |.:.....|||..||.....::::||:.|||
  Fly   226 QNDDGDTPLHLACISGSVDVVAALIRMAPHPCLLNIQNDVAQTPLHLAALTAQPNIMRILLLAGA 290

  Fly   101 SVDTPSADGGTPLFVACQGGHVKIVRELLDCGANVNAHMKDRATPVFISAQNGHRT---VLSLLI 162
            ........|.|.|.::|..|..:.||.|.:.......|...|        |.|||:   .:|.|.
  Fly   291 EPTVRDRHGNTALHLSCIAGEKQCVRALTEKFGATEIHEAHR--------QYGHRSNDKAVSSLS 347

  Fly   163 QA--GAEIDIKRIDGATPLWIAAQMGQDHICKVLLQNGANVDTVR-CDGATPLFKAAHKGHAAVI 224
            .|  .|:::|:..||...:.:||:.|...|.::|:.:||:::... ..|.|||..|....:..:.
  Fly   348 YACLPADLEIRNYDGERCVHLAAEAGHIDILRILVSHGADINAREGKSGRTPLHIAIEGCNEDLA 412

  Fly   225 TVLLKYRPNLGQLPNGESALHAAAMFGHMTVCKQLVAAGSDVLLKNHDGLTALQLAHQQKYTSIC 289
            ..||.....|    |.|:|.:|                          ||||.|.|.....:.:.
  Fly   413 NFLLDECEKL----NLETATYA--------------------------GLTAYQFACIMNKSRMQ 447

  Fly   290 DYLQER 295
            :.|::|
  Fly   448 NILEKR 453

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.