DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3104 and Cdkn2c

DIOPT Version :10

Sequence 1:NP_608724.1 Gene:CG3104 / 33486 FlyBaseID:FBgn0031473 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_031697.1 Gene:Cdkn2c / 12580 MGIID:105388 Length:168 Species:Mus musculus


Alignment Length:411 Identity:82/411 - (19%)
Similarity:149/411 - (36%) Gaps:104/411 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GTMITRVNAEDNEDDKLEFGLDALVAGQEQPFIIDPNTGFVFLNSSIE----GRAGQNFFVYV-- 98
            |:.:..::...::|.:.:: ||..|.|.:|    ..|..|...|..:|    |..|.:....|  
Mouse   559 GSSVLGIHQLKHKDQEQKY-LDDEVQGNQQ----SSNALFSSTNPPLEANDNGVLGDSVVPGVGQ 618

  Fly    99 ----------TVSDGSVTS---KNEV-----YVNILSKNATGLYK-----------SRGSQFTPS 134
                      :|.|..||:   |.||     .:..|..||..|.:           .:.|:...|
Mouse   619 HENRTEEPLSSVGDEEVTATAPKEEVKSEEHELKDLKNNAVELKRKVCMGEHLETEQQESKCVNS 683

  Fly   135 IDNIRQILPPGINLPGISS-------RP-------QIPLPPLPSQFTRKPPTVPGPGLESAEATP 185
            ...|::..|    |..:|:       :|       |....|:.|....:||........:.:...
Mouse   684 SQEIKEEAP----LDSVSNTMHDETDKPDEAVLDEQCKEEPVESSQMEEPPKTQVTSASNKKKKK 744

  Fly   186 TPPPPSKQTKTYPDRPIGTGNASTMVDSSPTTHPVEPSVYNGTKLSPIPPVINTTAPHPTIAGAS 250
            ......||.::....   :|.|..:::...:...|| ||..||...|:...::.|..:..:..:|
Mouse   745 KKKNKQKQKQSDKQE---SGTAMEVLNEDNSNQIVE-SVLEGTNEEPLANAVSETTMNADLPASS 805

  Fly   251 STPTTPKLPLQPTI---TTGTVPIHAHPHEETNTVKILLPVIISVAIIFVTAGLIAICFFRKYLC 312
            .:..|.|  .|..|   .|.||....|     :.|:::...:.|..|                  
Mouse   806 CSDITTK--GQDRIEVAATNTVVDDVH-----DGVQLVTDEVDSAEI------------------ 845

  Fly   313 ALSKTLKKKNKIDKAKKSNQ--SNGSSN--ITSTAEDSRNSIGLSHWTGPMAFSNRYTSPWERDT 373
              ||::   :..|.::.||.  |.|.||  |::|.:|..|:| :.:....:  ||...|....|.
Mouse   846 --SKSI---SNFDCSESSNDILSEGPSNNIISNTTDDPSNNI-ICNTADDL--SNNIISDTADDL 902

  Fly   374 NGHLQATSQLSEESNGSIVKD 394
            :.::  .|..:::.:.:|:.|
Mouse   903 SNNI--ISDTADDLSNNIISD 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3104NP_608724.1 ANKYR 13..277 CDD:440430 58/288 (20%)
ANK repeat 13..40 CDD:293786 82/411 (20%)
ANK repeat 42..73 CDD:293786 6/30 (20%)
ANK repeat 75..106 CDD:293786 9/46 (20%)
ANK repeat 108..137 CDD:293786 9/44 (20%)
ANK repeat 141..171 CDD:293786 7/43 (16%)
ANK repeat 174..204 CDD:293786 2/29 (7%)
ANK repeat 207..237 CDD:293786 8/29 (28%)
ANK repeat 239..270 CDD:293786 8/33 (24%)
Cdkn2cNP_031697.1 ANK 1 4..33
ANKYR <9..160 CDD:440430
ANK repeat 37..67 CDD:293786
ANK 2 37..65
ANK repeat 69..100 CDD:293786
ANK 3 69..98
ANK repeat 102..134 CDD:293786
ANK 4 102..132
ANK 5 136..165
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.