DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3104 and ankrd42

DIOPT Version :10

Sequence 1:NP_608724.1 Gene:CG3104 / 33486 FlyBaseID:FBgn0031473 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_002942124.2 Gene:ankrd42 / 100498077 XenbaseID:XB-GENE-5888011 Length:514 Species:Xenopus tropicalis


Alignment Length:271 Identity:74/271 - (27%)
Similarity:117/271 - (43%) Gaps:50/271 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HMAAMRGDEVALLRVLDSGKVHVDCKDEDGTTPLILAAAGGHTYCVMELLDQGADPNSRRLTGTT 78
            |:||:||.:..:..::.:| ..:..||:....|..||||.||::.:..:|..|.|.||...||..
 Frog    90 HLAAIRGQDACMQALIVNG-ADLSAKDDRHCCPAHLAAAHGHSFTLQSVLRSGVDINSSDRTGWK 153

  Fly    79 PLFFAAQGGHLDVVKILIKAGASVDTPSADGGTPLFVACQGGHVKIVRELLDCGANVNAHM---- 139
            |:.:||..|.|..:::|.:.||:::....:|..|..:|...||:..::.|:...::|...:    
 Frog   154 PVHYAAFHGRLGCLQLLFRWGATLEDADLNGNIPAHLAAMEGHLHCLKFLVSKASSVTRVLEATN 218

  Fly   140 --------------KDR---------------------ATPVFISAQNGHRTVLSLLIQAGAEID 169
                          ||.                     |.|..::|..|....|..|:::|. |:
 Frog   219 MNGETPKDLARKLYKDNIVQYIDGVEYERDHPDEQENLAFPAHVAAFKGDLVTLRKLVESGI-IN 282

  Fly   170 IKRID--GATPLWIAAQMGQDHICKVLLQNGANVDTVRCDGATPLFKAAHKGHAAVITVLLKYRP 232
            |...|  |||||..||..||....:.||:.||:.:.....|.||  |...|..|.:..|.|    
 Frog   283 INERDDKGATPLHKAAGQGQLECLQWLLEMGADYNITNEAGETP--KDVAKRFAKLAAVKL---- 341

  Fly   233 NLGQLPNGESA 243
             ||....||.:
 Frog   342 -LGGNVAGEDS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3104NP_608724.1 ANKYR 13..277 CDD:440430 74/271 (27%)
ANK repeat 13..40 CDD:293786 6/25 (24%)
ANK repeat 42..73 CDD:293786 12/30 (40%)
ANK repeat 75..106 CDD:293786 10/30 (33%)
ANK repeat 108..137 CDD:293786 7/28 (25%)
ANK repeat 141..171 CDD:293786 9/50 (18%)
ANK repeat 174..204 CDD:293786 14/31 (45%)
ANK repeat 207..237 CDD:293786 10/29 (34%)
ANK repeat 239..270 CDD:293786 2/5 (40%)
ankrd42XP_002942124.2 ANKYR 15..237 CDD:440430 39/147 (27%)
ANK repeat 22..48 CDD:293786
ANK repeat 50..82 CDD:293786
ANK repeat 84..115 CDD:293786 6/25 (24%)
ANK repeat 150..181 CDD:293786 10/30 (33%)
ANK repeat 183..213 CDD:293786 7/29 (24%)
Ank_2 189..320 CDD:463710 30/131 (23%)
ANK repeat 289..320 CDD:293786 13/30 (43%)
Ank_2 294..>360 CDD:463710 21/65 (32%)
Smc <384..>473 CDD:440809
Blue background indicates that the domain is not in the aligned region.

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