DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3117 and CG1304

DIOPT Version :10

Sequence 1:NP_608722.2 Gene:CG3117 / 33484 FlyBaseID:FBgn0031471 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster


Alignment Length:275 Identity:78/275 - (28%)
Similarity:116/275 - (42%) Gaps:58/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PQHSVDTLLRTSYPNALDGSPQVFGDQTKPNQFPWVTALFAKGSYLGGGSLITPGLVLTAAHILA 135
            |.||.        |.:|:|. .|.|:....||||...:|...||:..|||:::...||||||.:.
  Fly    20 PVHSA--------PGSLNGR-VVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVT 75

  Fly   136 GLSPND---------IMVRAGEWDLSSSEKLNPPMDRQVIKIMEHEAFNYSSGANDLALLFLDSP 191
            ....|.         ..:|||     |:::.:..:..||.:::.||  .|.:..||:|||.|:||
  Fly    76 NQDSNGNSVPIAAERFTIRAG-----SNDRFSGGVLVQVAEVIVHE--EYGNFLNDVALLRLESP 133

  Fly   192 FELRANIQTIRLPIPDKTFDRRICTVAGWGMRSSTDVDIQTIQQKVDLP------VVESSKCQRQ 250
            ..|.|:||.|.||..|...|..: .::|||          .|:.:.|||      .::|...:|.
  Fly   134 LILSASIQPIDLPTADTPADVDV-IISGWG----------RIKHQGDLPRYLQYNTLKSISLERC 187

  Fly   251 LRLTKMGSNYQLPASLMCAGGEEGRDVCS-LFGGFALFCSLDDDPNRYEQAGIVSF-GVGCGQAN 313
            ..|...|...:|     |...|.....|: ..||.|::        ..:..|:..| ...|| .:
  Fly   188 DELIGWGVQSEL-----CLIHEADNGACNGDSGGPAVY--------NNQVVGVAGFVWSACG-TS 238

  Fly   314 VPTTFTHVSKFMEWI 328
            .|..:..|....|||
  Fly   239 YPDGYARVYYHNEWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3117NP_608722.2 Tryp_SPc 95..329 CDD:238113 71/251 (28%)
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 72/254 (28%)

Return to query results.
Submit another query.