DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18557 and CFI

DIOPT Version :9

Sequence 1:NP_608721.1 Gene:CG18557 / 33483 FlyBaseID:FBgn0031470 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001362207.1 Gene:CFI / 3426 HGNCID:5394 Length:601 Species:Homo sapiens


Alignment Length:242 Identity:57/242 - (23%)
Similarity:94/242 - (38%) Gaps:59/242 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LNCGKSN------PNGLGGTVEEVVDQAKPNEFPWTVALMQNLINFFGAGTLVTENIVITAAHLM 127
            |:||..|      ...:||      .:|:..:.||.||: ::.......|..:....::||||.:
Human   333 LSCGVKNRMHIRRKRIVGG------KRAQLGDLPWQVAI-KDASGITCGGIYIGGCWILTAAHCL 390

  Fly   128 LDKTINDFGIIGGAW---------DLKQLAGKTIQWRTATRIVSHPDFNKMTGANNIALIVLETS 183
            .....:.:.|    |         |||::..:.:.     ||:.|.::|..|..|:||||.::..
Human   391 RASKTHRYQI----WTTVVDWIHPDLKRIVIEYVD-----RIIFHENYNAGTYQNDIALIEMKKD 446

  Fly   184 FVMK----PPIGPICWPTSGVSFD-RERCLVAGWGRPDFLAKNYSYKQKKIDLPIVSRSDCESLL 243
            ...|    |...|.|.|.|...|. .:.|:|:||||.....:.:|.:..::.|    .|:|....
Human   447 GNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKL----ISNCSKFY 507

  Fly   244 RRTAFVQSFQLDPTILCAGGERGRDAC-IGDGG------SPLMCPIP 283
            ....:.:..:      ||      |.| :...|      |.|..|.|
Human   508 GNRFYEKEME------CA------DCCSVAQAGVQWHDLSSLQPPPP 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18557NP_608721.1 Tryp_SPc 88..323 CDD:238113 51/217 (24%)
Tryp_SPc 90..320 CDD:214473 51/215 (24%)
CFINP_001362207.1 FIMAC 43..108 CDD:214493
SR 114..215 CDD:214555
LDLa 224..256 CDD:238060
Ldl_recept_a 257..293 CDD:365841
Tryp_SPc 348..>519 CDD:238113 44/196 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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