DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18557 and Tmprss6

DIOPT Version :9

Sequence 1:NP_608721.1 Gene:CG18557 / 33483 FlyBaseID:FBgn0031470 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_006242057.1 Gene:Tmprss6 / 315388 RGDID:1307138 Length:811 Species:Rattus norvegicus


Alignment Length:360 Identity:92/360 - (25%)
Similarity:141/360 - (39%) Gaps:69/360 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IRCCFWTLTETGAPCGLQMECVPQGLCKTSAWNQNAISWPSPCQRSESCCHSSQKLVIGAPLNCG 72
            |:.|...|.|....|....:|.....|         ||.|..|.|...|.:.|.:......:.||
  Rat   477 IKDCPNGLDERNCVCRAMFQCQEDSTC---------ISLPRVCDRQPDCLNGSDEEQCQEGVPCG 532

  Fly    73 -------------KSNPN------------------GLGGTVEEVVDQA--KPNEFPWTVALMQN 104
                         |.||.                  ||.|....:|..|  ...|:||..:|...
  Rat   533 TFTFQCEDRSCVKKPNPECDGQADCRDGSDEEHCDCGLQGPSSRIVGGAMSSEGEWPWQASLQIR 597

  Fly   105 LINFFGAGTLVTENIVITAAHLMLDKTINDFGIIGGAWDLKQLAGKTIQ---WR-----TATRIV 161
            ..:..| |.|:.:..||||||...:.::....:    |.:  ..||..|   |.     ..:|:.
  Rat   598 GRHICG-GALIADRWVITAAHCFQEDSMASPRL----WTV--FLGKMRQNSRWPGEVSFKVSRLF 655

  Fly   162 SHPDFNKMTGANNIALIVLETSFVMKPPIGPICWPTSGVSFD-RERCLVAGWGRPDFLAKNYSYK 225
            .||...:.:...::||:.|:...|....:.|:|.|.....|: .:.|.:.|||.........|..
  Rat   656 LHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCLPARSHFFEPGQHCWITGWGAQREGGPGSSTL 720

  Fly   226 QKKIDLPIVSRSDCESLLRRTAFVQSFQLDPTILCAGGERG-RDACIGDGGSPLMCPIPGHPAIY 289
            | |:|:.::.:..|....|       :|:.|.:||||..:| :|||.||.|.||:|..|.  ..:
  Rat   721 Q-KVDVQLIPQDLCNEAYR-------YQVTPRMLCAGYRKGKKDACQGDSGGPLVCKEPS--GRW 775

  Fly   290 ELVGIVNSGFSCGLENVPALYTNISHMRPWIEKQL 324
            .|.|:|:.|..||..|...:||.::.:..||::.|
  Rat   776 FLAGLVSWGLGCGRPNFFGVYTRVTRVVNWIQQVL 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18557NP_608721.1 Tryp_SPc 88..323 CDD:238113 68/246 (28%)
Tryp_SPc 90..320 CDD:214473 66/241 (27%)
Tmprss6XP_006242057.1 SEA 88..185 CDD:279699
LDLa 459..489 CDD:238060 4/11 (36%)
LDLa 495..525 CDD:238060 9/38 (24%)
Ldl_recept_a 529..566 CDD:278486 5/36 (14%)
Tryp_SPc 576..806 CDD:214473 67/246 (27%)
Tryp_SPc 577..809 CDD:238113 69/248 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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