DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18557 and LOC286960

DIOPT Version :9

Sequence 1:NP_608721.1 Gene:CG18557 / 33483 FlyBaseID:FBgn0031470 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:LOC286960 / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:232 Identity:67/232 - (28%)
Similarity:117/232 - (50%) Gaps:26/232 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 PWTVALMQNLINFFGAGTLVTENIVITAAHLMLDKTINDFGIIGGAWDLKQLAGKTIQWRTATRI 160
            |:.|:|...:.:..| |:|:::..|::|||....|    ..:..|..::..|.|.. |:..|.:|
  Rat    36 PYQVSLHDGISHQCG-GSLISDQWVLSAAHCYKRK----LQVRLGEHNIHVLEGGE-QFIDAEKI 94

  Fly   161 VSHPDFNKMTGANNIALIVLETSFVMKPPIGPICWPTSGVSFDRERCLVAGWGRPDFLAKNYSYK 225
            :.||::||.|..|:|.||.|::..|:...:..:..|.|..|.|.: |||:|||....:...|...
  Rat    95 IRHPEYNKDTLDNDIMLIKLKSPAVLNSQVSTVSLPRSCASTDAQ-CLVSGWGNTVSIGGKYPAL 158

  Fly   226 QKKIDLPIVSRSDCESLLRRTAFVQSF--QLDPTILCAGG-ERGRDACIGDGGSPLMCPIPGHPA 287
            .:.::.|::|.|.|:         :|:  |:...:.|.|. |.|:|:|.||.|.|::|.      
  Rat   159 LQCLEAPVLSASSCK---------KSYPGQITSNMFCLGFLEGGKDSCDGDSGGPVVCN------ 208

  Fly   288 IYELVGIVNSGFSCGLENVPALYTNISHMRPWIEKQL 324
             .|:.|||:.|..|.:...|.:||.:.:...||::.:
  Rat   209 -GEIQGIVSWGSVCAMRGKPGVYTKVCNYLSWIQETM 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18557NP_608721.1 Tryp_SPc 88..323 CDD:238113 67/229 (29%)
Tryp_SPc 90..320 CDD:214473 65/226 (29%)
LOC286960NP_775423.1 Tryp_SPc 23..240 CDD:214473 65/226 (29%)
Tryp_SPc 24..243 CDD:238113 67/229 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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