DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18557 and si:dkey-16l2.17

DIOPT Version :9

Sequence 1:NP_608721.1 Gene:CG18557 / 33483 FlyBaseID:FBgn0031470 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_001341498.1 Gene:si:dkey-16l2.17 / 100001520 ZFINID:ZDB-GENE-141212-262 Length:305 Species:Danio rerio


Alignment Length:273 Identity:66/273 - (24%)
Similarity:128/273 - (46%) Gaps:28/273 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 CGKSNPNG---LGGTVEEVVDQAKPNEFPWTVALMQNLINFFGAGTLVTENIVITAAHLMLDKT- 131
            ||:. |.|   :||.      :|.|..:||.|.:..........|:::.:|.|::|||...:.: 
Zfish    23 CGRP-PLGKRIVGGV------EASPGSWPWQVDIQMGSNGHVCGGSIIAKNWVLSAAHCFPNPSE 80

  Fly   132 INDFGIIGGAWDLKQLAGKTIQWRTAT---RIVSHPDFNKMTGANNIALIVLETSFVMKPPIGPI 193
            ::.:.:..|    :.|.....|:...:   |:|....:....|..::||:.|.........|.|:
Zfish    81 VSAYTLYMG----RHLLNGYNQFEKVSYVQRVVIPEGYTDPQGGRDVALVQLRAPVSWTDRIQPV 141

  Fly   194 CWPTSGVSFDR-ERCLVAGWG-RPDFLAKNYSYKQKKIDLPIVSRSDCESLLR-RTAFVQSFQLD 255
            |.|.:...|:. ..|.|.||| :.:.::...:...:::::||:.:|.|:.:.: .::...:..:.
Zfish   142 CLPFADFQFNSGTLCYVTGWGHKQEGVSLTGAAALREVEVPIIDQSSCQFMYQILSSDSSTVDIL 206

  Fly   256 PTILCAG-GERGRDACIGDGGSPLMCPIPGHPAIYELVGIVNSGFSCGLENVPALYTNISHMRPW 319
            ..::||| .|.|:|:|.||.|.||:||:.....|.  .|:|:.|..|..:|.|.:|:.:|.    
Zfish   207 SDMICAGYKEGGKDSCQGDSGGPLVCPVGNGTWIQ--AGVVSFGLGCAQKNRPGIYSRVSS---- 265

  Fly   320 IEKQLNDELNKPY 332
            .||.:...:.:.|
Zfish   266 FEKLIRTTVPEAY 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18557NP_608721.1 Tryp_SPc 88..323 CDD:238113 58/242 (24%)
Tryp_SPc 90..320 CDD:214473 57/237 (24%)
si:dkey-16l2.17XP_001341498.1 Tryp_SPc 32..273 CDD:238113 61/256 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587580
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.