DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18558 and RFNG

DIOPT Version :10

Sequence 1:NP_608720.2 Gene:CG18558 / 33482 FlyBaseID:FBgn0031469 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_002908.1 Gene:RFNG / 5986 HGNCID:9974 Length:331 Species:Homo sapiens


Alignment Length:229 Identity:60/229 - (26%)
Similarity:90/229 - (39%) Gaps:46/229 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 LTPLPELRSPNPLTKIA-------SRPLNDQLAKMMYRSVRIICLVLTWPKKYMSGARAISETW- 344
            |.|||..|:|.|....|       |||....|     |...:...|.|..|.:....|.:..|| 
Human    24 LLPLPLPRAPAPARTPAPAPRAPPSRPAAPSL-----RPDDVFIAVKTTRKNHGPRLRLLLRTWI 83

  Fly   345 --GRHCNRVIYYGSFPGTTISGLE-IVGLNAS--DTRSKLWGKTKAAFRHAYRNYGHEVDWFYKA 404
              .|....:...|..|...:.|.: ::..|.|  .||..|..|....: ..:...|.:  ||...
Human    84 SRARQQTFIFTDGDDPELELQGGDRVINTNCSAVRTRQALCCKMSVEY-DKFIESGRK--WFCHV 145

  Fly   405 DDDTYAVMENMRKLLKPYSPSNPIYFGSP-----------FKLGSTL------YMSGGAGYVLSK 452
            |||.|....::..||..:|||..:|.|.|           .:.|.|:      :.:||||:.||:
Human   146 DDDNYVNARSLLHLLSSFSPSQDVYLGRPSLDHPIEATERVQGGRTVTTVKFWFATGGAGFCLSR 210

  Fly   453 S-AVEL---LNLGA----AENCQPGDQGTEDYVM 478
            . |:::   .:||:    ||..:..|..|..|::
Human   211 GLALKMSPWASLGSFMSTAEQVRLPDDCTVGYIV 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18558NP_608720.2 Galactosyl_T <400..>458 CDD:473923 23/78 (29%)
RFNGNP_002908.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54 5/19 (26%)
Fringe 55..305 CDD:367085 49/198 (25%)

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